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Orthologous genes in OrthoFinder**

Species Gene Description
 hvu-r.1   123424538   pentatricopeptide repeat-containing protein At1g10270-like 
 hvu-r.1   123428213   pentatricopeptide repeat-containing protein At1g10270-like 
 tae-r.2   123190847   pentatricopeptide repeat-containing protein At1g10270 
 tae-r.2   123187200   pentatricopeptide repeat-containing protein At1g10270-like 
 tae-r.2   123054998   pentatricopeptide repeat-containing protein At1g10270 
 bdi-r.1   100845268   pentatricopeptide repeat-containing protein At1g10270 
 bdi-r.1   100820999   pentatricopeptide repeat-containing protein At1g10270 
 osa-u.5   4338555   pentatricopeptide repeat-containing protein At1g10270 
 zma-u.5   100191742   uncharacterized LOC100191742 
 sbi-r.1   8068990   pentatricopeptide repeat-containing protein At1g10270 
 sbi-r.1   8054217   pentatricopeptide repeat-containing protein At1g10270 
 ath-u.5   GRP23   glutamine-rich protein 23 
 gma-u.5   100802924   pentatricopeptide repeat-containing protein At1g10270 
 gma-u.5   100797162   pentatricopeptide repeat-containing protein At1g10270 
 sly-u.5   101259376   pentatricopeptide repeat-containing protein At1g10270 
 bra-r.6   103871799   pentatricopeptide repeat-containing protein At1g10270-like 
 bra-r.6   103868110   pentatricopeptide repeat-containing protein At1g10270-like 
 bra-r.6   103843308   pentatricopeptide repeat-containing protein At1g10270 
 vvi-u.5   100255686   pentatricopeptide repeat-containing protein At1g10270 
 ppo-u.5   18098353   pentatricopeptide repeat-containing protein At1g10270 
 ppo-u.5   18111121   pentatricopeptide repeat-containing protein At1g10270 
 mtr-u.5   11412880   pentatricopeptide repeat-containing protein At1g10270 
 ghi-r.1   107963159   pentatricopeptide repeat-containing protein At1g10270 
 ghi-r.1   107931603   pentatricopeptide repeat-containing protein At1g10270 
 bna-r.1   106362408   pentatricopeptide repeat-containing protein At1g10270-like 
 bna-r.1   111213903   pentatricopeptide repeat-containing protein At1g10270 
 bna-r.1   106418198   pentatricopeptide repeat-containing protein At1g10270 
 sot-r.1   102596557   pentatricopeptide repeat-containing protein At1g10270 
 cit-r.1   102625240   pentatricopeptide repeat-containing protein At1g10270 
 nta-r.1   107806585   pentatricopeptide repeat-containing protein At1g10270-like 
 nta-r.1   107771189   pentatricopeptide repeat-containing protein At1g10270 

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Top 50 coexpressed genes to 123424538 (hvu-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123424538 (hvu-r.1 coexpression data)

CoexMap"123424538"


hvuLOC123424538 | Entrez gene ID : 123424538    
Species hvu tae bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 2 3 2 1 1 2 1 2 1 3 1 2 1 2 3 1 1 2 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0009507 [list] [network] chloroplast  (755 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (4692 genes)  IEA  
Protein XP_044964103.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  mito 2,  cyto_mito 1  (predict for XP_044964103.1)
Subcellular
localization
TargetP
mito 7  (predict for XP_044964103.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

hvu-r.1
for
123424538
hvu-r.1
for
123428213
tae-r.2
for
123190847
tae-r.2
for
123187200
tae-r.2
for
123054998
bdi-r.1
for
100845268
bdi-r.1
for
100820999
osa-u.5
for
4338555
zma-u.5
for
100191742
sbi-r.1
for
8068990
sbi-r.1
for
8054217
ath-u.5
for
GRP23
gma-u.5
for
100802924
gma-u.5
for
100797162
sly-u.5
for
101259376
bra-r.6
for
103871799
bra-r.6
for
103868110
bra-r.6
for
103843308
vvi-u.5
for
100255686
ppo-u.5
for
18098353
ppo-u.5
for
18111121
mtr-u.5
for
11412880
ghi-r.1
for
107963159
ghi-r.1
for
107931603
bna-r.1
for
106362408
bna-r.1
for
111213903
bna-r.1
for
106418198
sot-r.1
for
102596557
cit-r.1
for
102625240
nta-r.1
for
107806585
nta-r.1
for
107771189


Ortholog ID: 5006
Species hvu hvu tae tae tae bdi bdi osa zma sbi sbi ath gma gma sly bra bra bra vvi ppo ppo mtr ghi ghi bna bna bna sot cit nta nta
Symbol LOC123424538 LOC123428213 LOC123187200 LOC123047187 LOC123043372 LOC100845268 LOC100820999 LOC4338555 LOC100191742 LOC8068990 LOC8054217 GRP23 LOC100802924 LOC100797162 LOC101259376 LOC103871799 LOC103868110 LOC103843308 LOC100255686 LOC18098353 LOC18111121 LOC11412880 LOC107963159 LOC107931603 LOC106362408 LOC111213903 LOC106418198 LOC102596557 LOC102625240 LOC107806585 LOC107771189
Function* pentatricopeptide repeat-containing protein At1g10270-like pentatricopeptide repeat-containing protein At1g10270-like pentatricopeptide repeat-containing protein At1g10270-like pentatricopeptide repeat-containing protein At1g10270 pentatricopeptide repeat-containing protein At1g10270 pentatricopeptide repeat-containing protein At1g10270 pentatricopeptide repeat-containing protein At1g10270 pentatricopeptide repeat-containing protein At1g10270 uncharacterized LOC100191742 pentatricopeptide repeat-containing protein At1g10270 pentatricopeptide repeat-containing protein At1g10270 glutamine-rich protein 23 pentatricopeptide repeat-containing protein At1g10270 pentatricopeptide repeat-containing protein At1g10270 pentatricopeptide repeat-containing protein At1g10270 pentatricopeptide repeat-containing protein At1g10270-like pentatricopeptide repeat-containing protein At1g10270-like pentatricopeptide repeat-containing protein At1g10270 pentatricopeptide repeat-containing protein At1g10270 pentatricopeptide repeat-containing protein At1g10270 pentatricopeptide repeat-containing protein At1g10270 pentatricopeptide repeat-containing protein At1g10270 pentatricopeptide repeat-containing protein At1g10270 pentatricopeptide repeat-containing protein At1g10270 pentatricopeptide repeat-containing protein At1g10270-like pentatricopeptide repeat-containing protein At1g10270 pentatricopeptide repeat-containing protein At1g10270 pentatricopeptide repeat-containing protein At1g10270 pentatricopeptide repeat-containing protein At1g10270 pentatricopeptide repeat-containing protein At1g10270-like pentatricopeptide repeat-containing protein At1g10270
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 3
bdi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03013 Nucleocytoplasmic transport 3
osa03008 Ribosome biogenesis in eukaryotes 2
osa03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 4
zma00230 Purine metabolism 3
zma01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 3
sbi00230 Purine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 6
ath03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 4
gma03013 Nucleocytoplasmic transport 2
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 5
sly03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00240 Pyrimidine metabolism 2
bra01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 4
ghi03083 Polycomb repressive complex 2
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 4
ghi03083 Polycomb repressive complex 2
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 4
bna03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 4
bna03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03018 RNA degradation 2
sot03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 4
nta00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 4
nta03430 Mismatch repair 2
nta03460 Fanconi anemia pathway 2
nta00230 Purine metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123424538 123428213 123187200 123047187 123043372 100845268 100820999 4338555 100191742 8068990 8054217 837566 100802924 100797162 101259376 103871799 103868110 103843308 100255686 18098353 18111121 11412880 107963159 107931603 106362408 111213903 106418198 102596557 102625240 107806585 107771189
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