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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100256041   VIN3-like protein 1 
 vvi-r.5   100256041   VIN3-like protein 1 
 vvi-m.5   100256041   VIN3-like protein 1 
 vvi-u.5   100259403   VIN3-like protein 1 
 ath-u.5   VRN5   Fibronectin type III domain-containing protein 
 gma-u.5   100816714   VIN3-like protein 1 
 gma-u.5   100816128   VIN3-like protein 1 
 gma-u.5   100815645   VIN3-like protein 1 
 ppo-u.5   7476260   VIN3-like protein 1 
 ppo-u.5   112323247   VIN3-like protein 1 
 mtr-u.5   25496889   VIN3-like protein 1 
 sly-u.5   101268103   VIN3-like protein 1 
 osa-u.5   4337793   VIN3-like protein 1 
 osa-u.5   4352406   VIN3-like protein 1 
 zma-u.5   103641378   VIN3-like protein 1 
 zma-u.5   100280056   VIN3-like protein 1 
 zma-u.5   103650592   VIN3-like protein 1 

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Top 50 coexpressed genes to 100256041 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100256041 (vvi-u.5 coexpression data)

CoexMap"100256041"


vviLOC100256041 | Entrez gene ID : 100256041      
Species vvi ath gma ppo mtr sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 4 1 3 2 1 1 2 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0010048 [list] [network] vernalization response  (4 genes)  IEA  
GO:0040029 [list] [network] epigenetic regulation of gene expression  (23 genes)  IEA  
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4232 genes)  IEA  
Protein XP_010656357.1 [sequence] [blastp]
XP_010656358.1 [sequence] [blastp]
XP_010656359.1 [sequence] [blastp]
XP_019078551.1 [sequence] [blastp]
XP_019078552.1 [sequence] [blastp]
XP_059596732.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 1,  E.R. 1,  cyto_E.R. 1  (predict for XP_010656357.1)
nucl 6,  cyto 1,  E.R. 1,  cyto_E.R. 1  (predict for XP_010656358.1)
nucl 5,  chlo 2,  cyto 1,  plas 1,  cyto_plas 1  (predict for XP_010656359.1)
nucl 5,  chlo 2,  cyto 1,  plas 1,  cyto_plas 1  (predict for XP_019078551.1)
nucl 5,  chlo 2,  cyto 1,  plas 1,  cyto_plas 1  (predict for XP_019078552.1)
nucl 5,  chlo 2,  cyto 1,  plas 1,  cyto_plas 1  (predict for XP_059596732.1)
Subcellular
localization
TargetP
other 8  (predict for XP_010656357.1)
other 8  (predict for XP_010656358.1)
chlo 8  (predict for XP_010656359.1)
chlo 8  (predict for XP_019078551.1)
chlo 8  (predict for XP_019078552.1)
chlo 8  (predict for XP_059596732.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100256041
vvi-r.5
for
100256041
vvi-m.5
for
100256041
vvi-u.5
for
100259403
ath-u.5
for
VRN5
gma-u.5
for
100816714
gma-u.5
for
100816128
gma-u.5
for
100815645
ppo-u.5
for
7476260
ppo-u.5
for
112323247
mtr-u.5
for
25496889
sly-u.5
for
101268103
osa-u.5
for
4337793
osa-u.5
for
4352406
zma-u.5
for
103641378
zma-u.5
for
100280056
zma-u.5
for
103650592


Ortholog ID: 5317
Species vvi vvi ath gma gma bra ppo ppo mtr ghi ghi bna cit sly sot nta nta osa osa zma zma tae tae hvu hvu sbi sbi bdi bdi
Symbol LOC100256041 LOC100259403 VRN5 LOC100816128 LOC100815645 LOC103828637 LOC7476260 LOC112323247 LOC25496889 LOC107942294 LOC107907232 LOC106345944 LOC102622056 LOC101268103 LOC102593387 LOC107777324 LOC107804058 LOC4337793 LOC4352406 LOC103650592 LOC103641378 LOC100127083 LOC123180423 LOC123398334 LOC123424733 LOC8064630 LOC8075961 LOC100838409 LOC100831951
Function* VIN3-like protein 1 VIN3-like protein 1 Fibronectin type III domain-containing protein VIN3-like protein 1 VIN3-like protein 1 VIN3-like protein 1 VIN3-like protein 1 VIN3-like protein 1 VIN3-like protein 1 VIN3-like protein 1 VIN3-like protein 1 VIN3-like protein 1 VIN3-like protein 1 VIN3-like protein 1 VIN3-like protein 1 VIN3-like protein 1 VIN3-like protein 1 VIN3-like protein 1 VIN3-like protein 1 VIN3-like protein 1 VIN3-like protein 1 VIN3-like protein 1 VIN3-like protein 1 VIN3-like protein 1 VIN3-like protein 1 VIN3-like protein 1 VIN3-like protein 1 VIN3-like protein 1 VIN3-like protein 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01250 Biosynthesis of nucleotide sugars 5
vvi00520 Amino sugar and nucleotide sugar metabolism 4
vvi00541 Biosynthesis of various nucleotide sugars 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00511 Other glycan degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 4
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04142 Lysosome 2
ppo04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03050 Proteasome 4
mtr04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00541 Biosynthesis of various nucleotide sugars 9
ghi01250 Biosynthesis of nucleotide sugars 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00541 Biosynthesis of various nucleotide sugars 9
ghi01250 Biosynthesis of nucleotide sugars 9
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03250 Viral life cycle - HIV-1 2
cit03272 Virion - Hepatitis viruses 2
cit04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 2
nta04016 MAPK signaling pathway - plant 2
nta04626 Plant-pathogen interaction 2
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 2
nta04626 Plant-pathogen interaction 2
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04144 Endocytosis 2
osa02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 5
hvu04144 Endocytosis 3
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00051 Fructose and mannose metabolism 2
hvu00541 Biosynthesis of various nucleotide sugars 2
hvu01250 Biosynthesis of nucleotide sugars 2
hvu04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100256041 100259403 822034 100816128 100815645 103828637 7476260 112323247 25496889 107942294 107907232 106345944 102622056 101268103 102593387 107777324 107804058 4337793 4352406 103650592 103641378 100127083 123180423 123398334 123424733 8064630 8075961 100838409 100831951
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