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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100256431   beta-carotene isomerase D27, chloroplastic 
 vvi-r.5   100256431   beta-carotene isomerase D27, chloroplastic 
 vvi-m.5   100256431   beta-carotene isomerase D27, chloroplastic 
 ath-u.5   AT1G64680   beta-carotene isomerase D27 
 gma-u.5   100780474   beta-carotene isomerase D27, chloroplastic 
 ppo-u.5   7467036   beta-carotene isomerase D27, chloroplastic 
 mtr-u.5   11426999   beta-carotene isomerase D27, chloroplastic-like 
 sly-u.5   101266539   beta-carotene isomerase D27, chloroplastic 
 osa-u.5   4344507   beta-carotene isomerase D27, chloroplastic-like 
 zma-u.5   100275523   uncharacterized LOC100275523 

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Top 50 coexpressed genes to 100256431 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100256431 (vvi-u.5 coexpression data)

CoexMap"100256431"


vviLOC100256431 | Entrez gene ID : 100256431      
Species vvi ath gma ppo mtr sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 3 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005506 [list] [network] iron ion binding  (426 genes)  IEA  
Protein XP_002279815.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_002279815.1)
Subcellular
localization
TargetP
mito 3  (predict for XP_002279815.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100256431
vvi-r.5
for
100256431
vvi-m.5
for
100256431
ath-u.5
for
AT1G64680
gma-u.5
for
100780474
ppo-u.5
for
7467036
mtr-u.5
for
11426999
sly-u.5
for
101266539
osa-u.5
for
4344507
zma-u.5
for
100275523


Ortholog ID: 9274
Species vvi ath gma bra ppo mtr ghi ghi bna bna cit sly sot nta nta osa zma tae tae hvu sbi bdi cre
Symbol LOC100256431 AT1G64680 LOC100780474 LOC103838102 LOC7467036 LOC11426999 LOC107951144 LOC107950780 LOC106366501 LOC106450614 LOC102631239 LOC101266539 LOC102602280 LOC107759732 LOC107788269 LOC4344507 LOC100275523 LOC123159827 LOC123147575 LOC123408633 LOC8066092 LOC100837900 CHLRE_16g661150v5
Function* beta-carotene isomerase D27, chloroplastic beta-carotene isomerase D27 beta-carotene isomerase D27, chloroplastic beta-carotene isomerase D27, chloroplastic beta-carotene isomerase D27, chloroplastic beta-carotene isomerase D27, chloroplastic-like beta-carotene isomerase D27, chloroplastic beta-carotene isomerase D27, chloroplastic beta-carotene isomerase D27, chloroplastic-like beta-carotene isomerase D27, chloroplastic beta-carotene isomerase D27, chloroplastic beta-carotene isomerase D27, chloroplastic beta-carotene isomerase D27, chloroplastic beta-carotene isomerase D27, chloroplastic beta-carotene isomerase D27, chloroplastic beta-carotene isomerase D27, chloroplastic-like uncharacterized LOC100275523 beta-carotene isomerase D27, chloroplastic-like beta-carotene isomerase D27, chloroplastic beta-carotene isomerase D27, chloroplastic beta-carotene isomerase D27, chloroplastic beta-carotene isomerase D27, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00630 Glyoxylate and dicarboxylate metabolism 4
ath01200 Carbon metabolism 4
ath00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 2
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00710 Carbon fixation by Calvin cycle 4
ppo01200 Carbon metabolism 4
ppo00010 Glycolysis / Gluconeogenesis 2
ppo01230 Biosynthesis of amino acids 2
ppo00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01200 Carbon metabolism 5
mtr00710 Carbon fixation by Calvin cycle 4
mtr00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 2
ghi04120 Ubiquitin mediated proteolysis 2
ghi04712 Circadian rhythm - plant 2
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 2
ghi04120 Ubiquitin mediated proteolysis 2
ghi04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 9
sly00710 Carbon fixation by Calvin cycle 7
sly00260 Glycine, serine and threonine metabolism 2
sly00630 Glyoxylate and dicarboxylate metabolism 2
sly00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 7
sot01200 Carbon metabolism 4
sot00710 Carbon fixation by Calvin cycle 3
sot00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01200 Carbon metabolism 5
nta00710 Carbon fixation by Calvin cycle 3
nta00190 Oxidative phosphorylation 2
nta00195 Photosynthesis 2
nta00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00710 Carbon fixation by Calvin cycle 5
nta01200 Carbon metabolism 5
nta00010 Glycolysis / Gluconeogenesis 3
nta00030 Pentose phosphate pathway 3
nta00051 Fructose and mannose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01200 Carbon metabolism 2
bdi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
cre01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100256431 842776 100780474 103838102 7467036 11426999 107951144 107950780 106366501 106450614 102631239 101266539 102602280 107759732 107788269 4344507 100275523 123159827 123147575 123408633 8066092 100837900 5723425
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