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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100258082   pentatricopeptide repeat-containing protein At3g23020 
 vvi-r.5   100258082   pentatricopeptide repeat-containing protein At3g23020 
 ath-u.5   AT3G23020   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   100812317   pentatricopeptide repeat-containing protein At3g23020 
 gma-u.5   100805774   pentatricopeptide repeat-containing protein At3g23020 
 bra-r.6   103868948   pentatricopeptide repeat-containing protein At3g23020 
 ppo-u.5   18102493   pentatricopeptide repeat-containing protein At3g23020-like 
 mtr-u.5   25482913   pentatricopeptide repeat-containing protein At3g23020 
 mtr-u.5   11416082   pentatricopeptide repeat-containing protein At3g23020 
 mtr-u.5   11418358   pentatricopeptide repeat-containing protein At3g23020 
 ghi-r.1   107929121   pentatricopeptide repeat-containing protein At3g23020 
 bna-r.1   106367502   pentatricopeptide repeat-containing protein At3g23020-like 
 bna-r.1   106363345   pentatricopeptide repeat-containing protein At3g23020 
 bna-r.1   125608761   pentatricopeptide repeat-containing protein At3g23020 
 cit-r.1   102610123   pentatricopeptide repeat-containing protein At3g23020 
 sly-u.5   101258192   pentatricopeptide repeat-containing protein At3g23020 
 sot-r.1   102587125   pentatricopeptide repeat-containing protein At3g23020 
 nta-r.1   107811004   pentatricopeptide repeat-containing protein At3g23020 
 nta-r.1   107760208   pentatricopeptide repeat-containing protein At3g23020-like 
 osa-u.5   4331715   pentatricopeptide repeat-containing protein At3g23020 
 zma-u.5   103631753   pentatricopeptide repeat-containing protein At3g23020 
 tae-r.2   123122434   pentatricopeptide repeat-containing protein At3g23020 
 tae-r.2   123112915   pentatricopeptide repeat-containing protein At3g23020 
 tae-r.2   123104661   pentatricopeptide repeat-containing protein At3g23020 
 hvu-r.1   123441924   pentatricopeptide repeat-containing protein At3g23020-like 
 hvu-r.1   123451760   pentatricopeptide repeat-containing protein At3g23020-like 
 sbi-r.1   8059846   pentatricopeptide repeat-containing protein At3g23020 
 bdi-r.1   100821783   pentatricopeptide repeat-containing protein At3g23020 

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Top 50 coexpressed genes to 100258082 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100258082 (vvi-u.5 coexpression data)

CoexMap"100258082"


vviLOC100258082 | Entrez gene ID : 100258082      
Species vvi ath gma bra ppo mtr ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 1 2 1 1 3 1 3 1 1 1 2 1 1 3 2 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4232 genes)  IEA  
Protein XP_002280003.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  chlo 3,  cyto 1,  mito 1  (predict for XP_002280003.2)
Subcellular
localization
TargetP
chlo 4  (predict for XP_002280003.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100258082
vvi-r.5
for
100258082
ath-u.5
for
AT3G23020
gma-u.5
for
100812317
gma-u.5
for
100805774
bra-r.6
for
103868948
ppo-u.5
for
18102493
mtr-u.5
for
25482913
mtr-u.5
for
11416082
mtr-u.5
for
11418358
ghi-r.1
for
107929121
bna-r.1
for
106367502
bna-r.1
for
106363345
bna-r.1
for
125608761
cit-r.1
for
102610123
sly-u.5
for
101258192
sot-r.1
for
102587125
nta-r.1
for
107811004
nta-r.1
for
107760208
osa-u.5
for
4331715
zma-u.5
for
103631753
tae-r.2
for
123122434
tae-r.2
for
123112915
tae-r.2
for
123104661
hvu-r.1
for
123441924
hvu-r.1
for
123451760
sbi-r.1
for
8059846
bdi-r.1
for
100821783


Ortholog ID: 7229
Species vvi ath gma gma bra ppo mtr mtr mtr ghi bna bna bna cit sly sot nta nta osa zma tae tae tae hvu hvu sbi bdi
Symbol LOC100258082 AT3G23020 LOC100812317 LOC100804661 LOC103868948 LOC18102493 LOC25482913 LOC11416082 LOC11418358 LOC107929121 LOC106367502 LOC106363345 LOC125608761 LOC102610123 LOC101258192 LOC102587125 LOC107811004 LOC107760208 LOC4331715 LOC103631753 LOC123122434 LOC123104661 LOC123104656 LOC123441924 LOC123451760 LOC8059846 LOC100821783
Function* pentatricopeptide repeat-containing protein At3g23020 Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At3g23020 pentatricopeptide repeat-containing protein At3g23020 pentatricopeptide repeat-containing protein At3g23020 pentatricopeptide repeat-containing protein At3g23020-like pentatricopeptide repeat-containing protein At3g23020 pentatricopeptide repeat-containing protein At3g23020 pentatricopeptide repeat-containing protein At3g23020 pentatricopeptide repeat-containing protein At3g23020 pentatricopeptide repeat-containing protein At3g23020-like pentatricopeptide repeat-containing protein At3g23020 pentatricopeptide repeat-containing protein At3g23020 pentatricopeptide repeat-containing protein At3g23020 pentatricopeptide repeat-containing protein At3g23020 pentatricopeptide repeat-containing protein At3g23020 pentatricopeptide repeat-containing protein At3g23020 pentatricopeptide repeat-containing protein At3g23020-like pentatricopeptide repeat-containing protein At3g23020 pentatricopeptide repeat-containing protein At3g23020 pentatricopeptide repeat-containing protein At3g23020 pentatricopeptide repeat-containing protein At3g23020 pentatricopeptide repeat-containing protein At3g23020 pentatricopeptide repeat-containing protein At3g23020-like pentatricopeptide repeat-containing protein At3g23020-like pentatricopeptide repeat-containing protein At3g23020 pentatricopeptide repeat-containing protein At3g23020
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03020 RNA polymerase 3
mtr03008 Ribosome biogenesis in eukaryotes 2
mtr03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03020 RNA polymerase 3
mtr03008 Ribosome biogenesis in eukaryotes 2
mtr03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 2
mtr03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 2
ghi03410 Base excision repair 2
ghi03420 Nucleotide excision repair 2
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 2
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00970 Aminoacyl-tRNA biosynthesis 2
osa00860 Porphyrin metabolism 2
osa01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01230 Biosynthesis of amino acids 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100258082 821876 100812317 100804661 103868948 18102493 25482913 11416082 11418358 107929121 106367502 106363345 125608761 102610123 101258192 102587125 107811004 107760208 4331715 103631753 123122434 123104661 123104656 123441924 123451760 8059846 100821783
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