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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107811004   pentatricopeptide repeat-containing protein At3g23020 
 sly-u.5   101258192   pentatricopeptide repeat-containing protein At3g23020 
 ath-u.5   AT3G23020   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   100812317   pentatricopeptide repeat-containing protein At3g23020 
 gma-u.5   100805774   pentatricopeptide repeat-containing protein At3g23020 
 vvi-u.5   100258082   pentatricopeptide repeat-containing protein At3g23020 
 ppo-u.5   18102493   pentatricopeptide repeat-containing protein At3g23020-like 
 mtr-u.5   25482913   pentatricopeptide repeat-containing protein At3g23020 
 mtr-u.5   11416082   pentatricopeptide repeat-containing protein At3g23020 
 mtr-u.5   11418358   pentatricopeptide repeat-containing protein At3g23020 
 osa-u.5   4331715   pentatricopeptide repeat-containing protein At3g23020 
 zma-u.5   103631753   pentatricopeptide repeat-containing protein At3g23020 

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Top 50 coexpressed genes to 107811004 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107811004 (nta-r.1 coexpression data)

CoexMap"107811004"


ntaLOC107811004 | Entrez gene ID : 107811004      
Species nta sly ath gma vvi ppo mtr osa zma hvu bna cit bra ghi sbi bdi tae cre sot
Paralog 1 1 1 2 1 1 3 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003729 [list] [network] mRNA binding  (573 genes)  IEA  
GO:0005515 [list] [network] protein binding  (7685 genes)  IEA  
Protein XP_016491328.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 2,  chlo 2,  cysk_nucl 1,  plas 1,  E.R. 1,  chlo_mito 1,  E.R._plas 1  (predict for XP_016491328.2)
Subcellular
localization
TargetP
other 5,  scret 3  (predict for XP_016491328.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107811004
sly-u.5
for
101258192
ath-u.5
for
AT3G23020
gma-u.5
for
100812317
gma-u.5
for
100805774
vvi-u.5
for
100258082
ppo-u.5
for
18102493
mtr-u.5
for
25482913
mtr-u.5
for
11416082
mtr-u.5
for
11418358
osa-u.5
for
4331715
zma-u.5
for
103631753


Ortholog ID: 7229
Species nta nta sly sot ath gma gma bra vvi ppo mtr mtr ghi bna bna cit osa zma tae tae hvu hvu sbi bdi
Symbol LOC107760208 LOC107811004 LOC101258192 LOC102587125 AT3G23020 LOC100812317 LOC100804661 LOC103868948 LOC100258082 LOC18102493 LOC11416082 LOC25482913 LOC107929121 LOC106367502 LOC125608761 LOC102610123 LOC4331715 LOC103631753 LOC123122434 LOC123104656 LOC123441924 LOC123451760 LOC8059846 LOC100821783
Function* pentatricopeptide repeat-containing protein At3g23020-like pentatricopeptide repeat-containing protein At3g23020 pentatricopeptide repeat-containing protein At3g23020 pentatricopeptide repeat-containing protein At3g23020 Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At3g23020 pentatricopeptide repeat-containing protein At3g23020 pentatricopeptide repeat-containing protein At3g23020 pentatricopeptide repeat-containing protein At3g23020 pentatricopeptide repeat-containing protein At3g23020-like pentatricopeptide repeat-containing protein At3g23020 pentatricopeptide repeat-containing protein At3g23020 pentatricopeptide repeat-containing protein At3g23020 pentatricopeptide repeat-containing protein At3g23020-like pentatricopeptide repeat-containing protein At3g23020 pentatricopeptide repeat-containing protein At3g23020 pentatricopeptide repeat-containing protein At3g23020 pentatricopeptide repeat-containing protein At3g23020 pentatricopeptide repeat-containing protein At3g23020 pentatricopeptide repeat-containing protein At3g23020 pentatricopeptide repeat-containing protein At3g23020-like pentatricopeptide repeat-containing protein At3g23020-like pentatricopeptide repeat-containing protein At3g23020 pentatricopeptide repeat-containing protein At3g23020
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 2
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03020 RNA polymerase 3
mtr03008 Ribosome biogenesis in eukaryotes 2
mtr03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03020 RNA polymerase 3
mtr03008 Ribosome biogenesis in eukaryotes 2
mtr03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 2
ghi03410 Base excision repair 2
ghi03420 Nucleotide excision repair 2
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00970 Aminoacyl-tRNA biosynthesis 2
osa00860 Porphyrin metabolism 2
osa01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01230 Biosynthesis of amino acids 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107760208 107811004 101258192 102587125 821876 100812317 100804661 103868948 100258082 18102493 11416082 25482913 107929121 106367502 125608761 102610123 4331715 103631753 123122434 123104656 123441924 123451760 8059846 100821783
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