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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100258154   RNA-binding NOB1-like protein 
 vvi-r.5   100258154   RNA-binding NOB1-like protein 
 vvi-m.5   100258154   RNA-binding NOB1-like protein 
 ath-u.5   AT5G41190   RNA-binding NOB1-like protein 
 gma-u.5   100800291   RNA-binding NOB1-like protein 
 gma-u.5   100785714   RNA-binding NOB1-like protein 
 bra-r.6   103864065   20S-pre-rRNA D-site endonuclease nob1 
 bra-r.6   103850212   20S-pre-rRNA D-site endonuclease nob1-like 
 ppo-u.5   7465848   RNA-binding NOB1-like protein 
 mtr-u.5   11435776   RNA-binding NOB1-like protein 
 ghi-r.1   107890684   RNA-binding NOB1-like protein 
 ghi-r.1   107896482   RNA-binding NOB1-like protein 
 bna-r.1   106352712   RNA-binding NOB1-like protein 
 bna-r.1   106435275   RNA-binding NOB1-like protein 
 bna-r.1   106446201   RNA-binding NOB1-like protein 
 cit-r.1   102614044   RNA-binding NOB1-like protein 
 sly-u.5   101252008   RNA-binding NOB1-like protein 
 sot-r.1   102598034   RNA-binding protein NOB1-like 
 sot-r.1   102595779   RNA-binding protein NOB1-like 
 nta-r.1   107781727   RNA-binding NOB1-like protein 
 nta-r.1   107828407   RNA-binding NOB1-like protein 
 osa-u.5   4328064   RNA-binding NOB1-like protein 
 zma-u.5   100276770   uncharacterized LOC100276770 
 zma-u.5   100276745   uncharacterized LOC100276745 
 tae-r.2   123135589   RNA-binding NOB1-like protein 
 tae-r.2   123143155   RNA-binding NOB1-like protein 
 tae-r.2   123131736   RNA-binding NOB1-like protein 
 hvu-r.1   123401517   RNA-binding NOB1-like protein 
 sbi-r.1   8068218   RNA-binding protein NOB1 
 bdi-r.1   100834504   RNA-binding protein NOB1 
 cre-r.1   CHLRE_01g031750v5   uncharacterized protein 

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Top 50 coexpressed genes to 100258154 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100258154 (vvi-u.5 coexpression data)

CoexMap"100258154"


vviLOC100258154 | Entrez gene ID : 100258154      
Species vvi ath gma bra ppo mtr ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 1 2 2 1 1 2 3 1 1 2 2 1 2 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG vvi03008 [list] [network] Ribosome biogenesis in eukaryotes (287 genes)
GO BP
GO:0030490 [list] [network] maturation of SSU-rRNA  (50 genes)  IEA  
GO CC
GO:0030688 [list] [network] preribosome, small subunit precursor  (12 genes)  IEA  
GO MF
GO:0004521 [list] [network] RNA endonuclease activity  (92 genes)  IEA  
Protein XP_002269627.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  cyto 1  (predict for XP_002269627.2)
Subcellular
localization
TargetP
chlo 6,  other 3  (predict for XP_002269627.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100258154
vvi-r.5
for
100258154
vvi-m.5
for
100258154
ath-u.5
for
AT5G41190
gma-u.5
for
100800291
gma-u.5
for
100785714
bra-r.6
for
103864065
bra-r.6
for
103850212
ppo-u.5
for
7465848
mtr-u.5
for
11435776
ghi-r.1
for
107890684
ghi-r.1
for
107896482
bna-r.1
for
106352712
bna-r.1
for
106435275
bna-r.1
for
106446201
cit-r.1
for
102614044
sly-u.5
for
101252008
sot-r.1
for
102598034
sot-r.1
for
102595779
nta-r.1
for
107781727
nta-r.1
for
107828407
osa-u.5
for
4328064
zma-u.5
for
100276770
zma-u.5
for
100276745
tae-r.2
for
123135589
tae-r.2
for
123143155
tae-r.2
for
123131736
hvu-r.1
for
123401517
sbi-r.1
for
8068218
bdi-r.1
for
100834504
cre-r.1
for
CHLRE_01g031750v5


Ortholog ID: 8174
Species vvi ath gma gma bra bra ppo mtr ghi ghi bna bna bna cit sly sot sot nta nta osa zma zma tae tae tae hvu sbi bdi cre
Symbol LOC100258154 AT5G41190 LOC100800291 LOC100785714 LOC103864065 LOC103850212 LOC7465848 LOC11435776 LOC107890684 LOC107896482 LOC106352712 LOC106435275 LOC106446201 LOC102614044 LOC101252008 LOC102598034 LOC102595779 LOC107781727 LOC107828407 LOC4328064 LOC100276770 LOC100276745 LOC123135589 LOC123143155 LOC123131736 LOC123401517 LOC8068218 LOC100834504 CHLRE_01g031750v5
Function* RNA-binding NOB1-like protein RNA-binding NOB1-like protein RNA-binding NOB1-like protein RNA-binding NOB1-like protein 20S-pre-rRNA D-site endonuclease nob1 20S-pre-rRNA D-site endonuclease nob1-like RNA-binding NOB1-like protein RNA-binding NOB1-like protein RNA-binding NOB1-like protein RNA-binding NOB1-like protein RNA-binding NOB1-like protein RNA-binding NOB1-like protein RNA-binding NOB1-like protein RNA-binding NOB1-like protein RNA-binding NOB1-like protein RNA-binding protein NOB1-like RNA-binding protein NOB1-like RNA-binding NOB1-like protein RNA-binding NOB1-like protein RNA-binding NOB1-like protein uncharacterized LOC100276770 uncharacterized LOC100276745 RNA-binding NOB1-like protein RNA-binding NOB1-like protein RNA-binding NOB1-like protein RNA-binding NOB1-like protein RNA-binding protein NOB1 RNA-binding protein NOB1 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 9
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 4
mtr03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00970 Aminoacyl-tRNA biosynthesis 2
cit03008 Ribosome biogenesis in eukaryotes 2
cit03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 4
sly03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 11
nta03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 6
nta03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 8
tae00240 Pyrimidine metabolism 2
tae01232 Nucleotide metabolism 2
tae01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 2
hvu01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100258154 834121 100800291 100785714 103864065 103850212 7465848 11435776 107890684 107896482 106352712 106435275 106446201 102614044 101252008 102598034 102595779 107781727 107828407 4328064 100276770 100276745 123135589 123143155 123131736 123401517 8068218 100834504 66052079
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