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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   100276770   uncharacterized LOC100276770 
 zma-r.6   100276770   uncharacterized LOC100276770 
 zma-u.5   100276745   uncharacterized LOC100276745 
 osa-u.5   4328064   RNA-binding NOB1-like protein 
 ath-u.5   AT5G41190   RNA-binding NOB1-like protein 
 gma-u.5   100800291   RNA-binding NOB1-like protein 
 gma-u.5   100785714   RNA-binding NOB1-like protein 
 sly-u.5   101252008   RNA-binding NOB1-like protein 
 vvi-u.5   100258154   RNA-binding NOB1-like protein 
 ppo-u.5   7465848   RNA-binding NOB1-like protein 
 mtr-u.5   11435776   RNA-binding NOB1-like protein 

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Top 50 coexpressed genes to 100276770 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100276770 (zma-u.5 coexpression data)

CoexMap"100276770"


zmaLOC100276770 | Entrez gene ID : 100276770      
Species zma osa ath gma sly vvi ppo mtr hvu bna cit bra ghi sbi bdi nta tae cre sot
Paralog 3 1 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG zma03008 [list] [network] Ribosome biogenesis in eukaryotes (2556 genes)
GO BP
GO:0030490 [list] [network] maturation of SSU-rRNA  (56 genes)  IEA  
GO:0042274 [list] [network] ribosomal small subunit biogenesis  (87 genes)  IEA  
GO CC
GO:0030688 [list] [network] preribosome, small subunit precursor  (23 genes)  IEA  
GO MF
GO:0004521 [list] [network] RNA endonuclease activity  (46 genes)  IEA  
Protein NP_001354244.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 7,  chlo 2  (predict for NP_001354244.1)
Subcellular
localization
TargetP
other 4  (predict for NP_001354244.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
100276770
zma-r.6
for
100276770
zma-u.5
for
100276745
osa-u.5
for
4328064
ath-u.5
for
AT5G41190
gma-u.5
for
100800291
gma-u.5
for
100785714
sly-u.5
for
101252008
vvi-u.5
for
100258154
ppo-u.5
for
7465848
mtr-u.5
for
11435776


Ortholog ID: 8174
Species zma zma sbi osa tae tae hvu bdi ath gma gma sly bra bra vvi ppo mtr ghi ghi bna bna sot sot cit nta nta cre
Symbol LOC100276745 LOC100276770 LOC8068218 LOC4328064 LOC123131736 LOC123135589 LOC123401517 LOC100834504 AT5G41190 LOC100800291 LOC100785714 LOC101252008 LOC103864065 LOC103850212 LOC100258154 LOC7465848 LOC11435776 LOC107896482 LOC107890684 LOC106352712 LOC106446201 LOC102598034 LOC102595779 LOC102614044 LOC107781727 LOC107828407 CHLRE_01g031750v5
Function* uncharacterized LOC100276745 uncharacterized LOC100276770 RNA-binding protein NOB1 RNA-binding NOB1-like protein RNA-binding NOB1-like protein RNA-binding NOB1-like protein RNA-binding NOB1-like protein RNA-binding protein NOB1 RNA-binding NOB1-like protein RNA-binding NOB1-like protein RNA-binding NOB1-like protein RNA-binding NOB1-like protein 20S-pre-rRNA D-site endonuclease nob1 20S-pre-rRNA D-site endonuclease nob1-like RNA-binding NOB1-like protein RNA-binding NOB1-like protein RNA-binding NOB1-like protein RNA-binding NOB1-like protein RNA-binding NOB1-like protein RNA-binding NOB1-like protein RNA-binding NOB1-like protein RNA-binding protein NOB1-like RNA-binding protein NOB1-like RNA-binding NOB1-like protein RNA-binding NOB1-like protein RNA-binding NOB1-like protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 8
tae00240 Pyrimidine metabolism 2
tae01232 Nucleotide metabolism 2
tae01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 2
hvu01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 9
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 4
sly03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 4
mtr03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00970 Aminoacyl-tRNA biosynthesis 2
cit03008 Ribosome biogenesis in eukaryotes 2
cit03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 11
nta03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 6
nta03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100276745 100276770 8068218 4328064 123131736 123135589 123401517 100834504 834121 100800291 100785714 101252008 103864065 103850212 100258154 7465848 11435776 107896482 107890684 106352712 106446201 102598034 102595779 102614044 107781727 107828407 66052079
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