ATTED-II : GeneCoexpression result

Species	Gene	Description
vvi-u.5	100258737	uncharacterized LOC100258737
vvi-r.5	100258737	uncharacterized LOC100258737
vvi-u.5	100259487	uncharacterized LOC100259487
vvi-u.5	100250124	uncharacterized LOC100250124
vvi-u.5	100256824	uncharacterized LOC100256824
ath-u.5	AT1G14260	RING/FYVE/PHD zinc finger superfamily protein
ath-u.5	AT5G62460	RING/FYVE/PHD zinc finger superfamily protein
gma-u.5	100805050	E3 ubiquitin-protein ligase MARCHF4
gma-u.5	100817542	uncharacterized LOC100817542
gma-u.5	100812998	uncharacterized LOC100812998
ppo-u.5	7494619	uncharacterized LOC7494619
ppo-u.5	7498170	uncharacterized LOC7498170
ppo-u.5	7492938	uncharacterized LOC7492938
mtr-u.5	11418055	uncharacterized LOC11418055
mtr-u.5	11437485	uncharacterized LOC11437485
mtr-u.5	25502689	uncharacterized LOC25502689
sly-u.5	101267890	uncharacterized LOC101267890
sly-u.5	101247951	uncharacterized LOC101247951
sly-u.5	101260808	uncharacterized LOC101260808
osa-u.5	4324964	uncharacterized LOC4324964
osa-u.5	4326041	uncharacterized LOC4326041
osa-u.5	4329759	uncharacterized LOC4329759
zma-u.5	103636408	uncharacterized LOC103636408
zma-u.5	100193371	uncharacterized LOC100193371

Annotation

functional annotation

KEGG

GO BP

GO:0016567 [list] [network] protein ubiquitination

(272 genes)

IEA

GO CC

GO:0016020 [list] [network] membrane

(2991 genes)

IEA

GO MF

GO:0004842 [list] [network] ubiquitin-protein transferase activity	(280 genes)	IEA
GO:0008270 [list] [network] zinc ion binding	(811 genes)	IEA

Protein

XP_010660371.1 [sequence] [blastp]
XP_019080652.1 [sequence] [blastp]
XP_059598619.1 [sequence] [blastp]
XP_059598620.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 6, nucl 2, chlo 1, mito 1, plas 1, chlo_mito 1, mito_plas 1	(predict for XP_010660371.1)
cyto 6, nucl 2, chlo 1, mito 1, plas 1, chlo_mito 1, mito_plas 1	(predict for XP_019080652.1)
nucl 4, cyto 4, cyto_nucl 4	(predict for XP_059598619.1)
nucl 4, cyto 4, cyto_nucl 4	(predict for XP_059598620.1)

Subcellular
localization
TargetP

other 9	(predict for XP_010660371.1)
other 9	(predict for XP_019080652.1)
other 7, scret 3	(predict for XP_059598619.1)
other 7, scret 3	(predict for XP_059598620.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	vvi-u.5 for 100258737	vvi-r.5 for 100258737	vvi-u.5 for 100259487	vvi-u.5 for 100250124	vvi-u.5 for 100256824	ath-u.5 for AT1G14260	ath-u.5 for AT5G62460	gma-u.5 for 100805050	gma-u.5 for 100817542	gma-u.5 for 100812998	ppo-u.5 for 7494619	ppo-u.5 for 7498170	ppo-u.5 for 7492938	mtr-u.5 for 11418055	mtr-u.5 for 11437485	mtr-u.5 for 25502689	sly-u.5 for 101267890	sly-u.5 for 101247951	sly-u.5 for 101260808	osa-u.5 for 4324964	osa-u.5 for 4326041	osa-u.5 for 4329759	zma-u.5 for 103636408	zma-u.5 for 100193371

Ortholog

Ortholog ID: 308

Species

vvi

ath

gma

bra

ppo

mtr

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

uncharacterized LOC100250124

uncharacterized LOC100256824

RING/FYVE/PHD zinc finger superfamily protein

uncharacterized LOC100812120

uncharacterized LOC103874679

uncharacterized LOC18104586

uncharacterized LOC7492938

uncharacterized LOC11437485

uncharacterized LOC11421871

uncharacterized LOC107916558

uncharacterized LOC125591300

uncharacterized LOC102615152

uncharacterized LOC102627455

uncharacterized LOC101260808

uncharacterized LOC102604544

uncharacterized LOC102584648

uncharacterized LOC107832834

uncharacterized LOC4329759

protein binding protein

uncharacterized LOC100194121

uncharacterized LOC123121689

uncharacterized LOC123086136

uncharacterized LOC123448344

uncharacterized LOC123442512

uncharacterized LOC110432262

uncharacterized LOC110435737

uncharacterized LOC100834851

uncharacterized LOC100838458

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04075	Plant hormone signal transduction	2
vvi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04075	Plant hormone signal transduction	2
vvi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	2
gma04141	Protein processing in endoplasmic reticulum	2
gma04144	Endocytosis	2
gma00510	N-Glycan biosynthesis	2
gma00513	Various types of N-glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04120	Ubiquitin mediated proteolysis	2
bra03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04148	Efferocytosis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04016	MAPK signaling pathway - plant	4
bna04626	Plant-pathogen interaction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04626	Plant-pathogen interaction	4
sly04075	Plant hormone signal transduction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04141	Protein processing in endoplasmic reticulum	3
sot03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04712	Circadian rhythm - plant	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04712	Circadian rhythm - plant	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00073	Cutin, suberine and wax biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04145	Phagosome	3
tae04148	Efferocytosis	3
tae04517	IgSF CAM signaling	3
tae04518	Integrin signaling	3
tae04620	Toll-like receptor signaling pathway	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04141	Protein processing in endoplasmic reticulum	3
hvu04144	Endocytosis	3
hvu03083	Polycomb repressive complex	2
hvu04120	Ubiquitin mediated proteolysis	2
hvu04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04142	Lysosome	2
sbi03040	Spliceosome	2
sbi03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00062	Fatty acid elongation	2
bdi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre04144	Endocytosis	2
cre04145	Phagosome	2
cre04148	Efferocytosis	2

Expression

Expression pattern

Entrez Gene ID^*

100250124

100256824

836366

100812120

103874679

18104586

7492938

11437485

11421871

107916558

125591300

102615152

102627455

101260808

102604544

102584648

107832834

4329759

100284488

100194121

123121689

123086136

123448344

123442512

110432262

110435737

100834851

100838458

5723150

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100258737 (vvi-u.5 coexpression data)

Top 50 enrichment test to 100258737 (vvi-u.5 coexpression data)


Species	vvi	ath	gma	ppo	mtr	sly	osa	zma	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	5	2	3	3	3	3	3	2	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100258737 (vvi-u.5 coexpression data)

Top 50 enrichment test to 100258737 (vvi-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**