ATTED-II : GeneCoexpression result

Species	Gene	Description
zma-u.5	103636408	uncharacterized LOC103636408
zma-r.6	103636408	uncharacterized LOC103636408
zma-m.5	103636408	uncharacterized LOC103636408
zma-u.5	100193371	uncharacterized LOC100193371
zma-u.5	100284488	protein binding protein
zma-u.5	100194121	uncharacterized LOC100194121
osa-u.5	4324964	uncharacterized LOC4324964
osa-u.5	4350860	uncharacterized LOC4350860
osa-u.5	4329759	uncharacterized LOC4329759
ath-u.5	AT1G14260	RING/FYVE/PHD zinc finger superfamily protein
ath-u.5	AT5G62460	RING/FYVE/PHD zinc finger superfamily protein
gma-u.5	100794088	uncharacterized LOC100794088
gma-u.5	100817542	uncharacterized LOC100817542
gma-u.5	100779674	uncharacterized LOC100779674
sly-u.5	101254808	uncharacterized LOC101254808
sly-u.5	101260808	uncharacterized LOC101260808
vvi-u.5	100254146	uncharacterized LOC100254146
vvi-u.5	100259487	uncharacterized LOC100259487
vvi-u.5	100258737	uncharacterized LOC100258737
ppo-u.5	7492938	uncharacterized LOC7492938
ppo-u.5	7494619	uncharacterized LOC7494619
ppo-u.5	7498170	uncharacterized LOC7498170
mtr-u.5	11421871	uncharacterized LOC11421871
mtr-u.5	11418055	uncharacterized LOC11418055
mtr-u.5	11437485	uncharacterized LOC11437485

Annotation

functional annotation

KEGG

GO BP

GO:0016567 [list] [network] protein ubiquitination

(391 genes)

IEA

GO CC

GO:0016020 [list] [network] membrane

(3751 genes)

IEA

GO MF

GO:0004842 [list] [network] ubiquitin-protein transferase activity	(430 genes)	IEA
GO:0008270 [list] [network] zinc ion binding	(807 genes)	IEA

Protein

XP_020398723.1 [sequence] [blastp]
XP_020398724.1 [sequence] [blastp]
XP_020398725.1 [sequence] [blastp]
XP_020398726.1 [sequence] [blastp]
XP_023156676.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 9, cyto 1, mito 1	(predict for XP_020398723.1)
chlo 6, plas 1, vacu 1	(predict for XP_020398724.1)
chlo 6, vacu 2, plas 1	(predict for XP_020398725.1)
chlo 10	(predict for XP_020398726.1)
chlo 9	(predict for XP_023156676.1)

Subcellular
localization
TargetP

other 9	(predict for XP_020398723.1)
other 9	(predict for XP_020398724.1)
other 9	(predict for XP_020398725.1)
other 9	(predict for XP_020398726.1)
other 9	(predict for XP_023156676.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	zma-u.5 for 103636408	zma-r.6 for 103636408	zma-m.5 for 103636408	zma-u.5 for 100193371	zma-u.5 for 100284488	zma-u.5 for 100194121	osa-u.5 for 4324964	osa-u.5 for 4350860	osa-u.5 for 4329759	ath-u.5 for AT1G14260	ath-u.5 for AT5G62460	gma-u.5 for 100794088	gma-u.5 for 100817542	gma-u.5 for 100779674	sly-u.5 for 101254808	sly-u.5 for 101260808	vvi-u.5 for 100254146	vvi-u.5 for 100259487	vvi-u.5 for 100258737	ppo-u.5 for 7492938	ppo-u.5 for 7494619	ppo-u.5 for 7498170	mtr-u.5 for 11421871	mtr-u.5 for 11418055	mtr-u.5 for 11437485

Ortholog

Ortholog ID: 308

Species

zma

sbi

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

Function^*

protein binding protein

uncharacterized LOC100194121

uncharacterized LOC110432262

uncharacterized LOC110435737

uncharacterized LOC4329759

uncharacterized LOC123121689

uncharacterized LOC123086136

uncharacterized LOC123448344

uncharacterized LOC123442512

uncharacterized LOC100834851

uncharacterized LOC100838458

RING/FYVE/PHD zinc finger superfamily protein

uncharacterized LOC100812120

uncharacterized LOC101260808

uncharacterized LOC103874679

uncharacterized LOC100250124

uncharacterized LOC100256824

uncharacterized LOC18104586

uncharacterized LOC7492938

uncharacterized LOC11437485

uncharacterized LOC11421871

uncharacterized LOC107916558

uncharacterized LOC125591300

uncharacterized LOC102604544

uncharacterized LOC102584648

uncharacterized LOC102615152

uncharacterized LOC102627455

uncharacterized LOC107832834

uncharacterized protein

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04712	Circadian rhythm - plant	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00073	Cutin, suberine and wax biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04142	Lysosome	2
sbi03040	Spliceosome	2
sbi03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04712	Circadian rhythm - plant	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04145	Phagosome	3
tae04148	Efferocytosis	3
tae04517	IgSF CAM signaling	3
tae04518	Integrin signaling	3
tae04620	Toll-like receptor signaling pathway	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04141	Protein processing in endoplasmic reticulum	3
hvu04144	Endocytosis	3
hvu03083	Polycomb repressive complex	2
hvu04120	Ubiquitin mediated proteolysis	2
hvu04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00062	Fatty acid elongation	2
bdi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	2
gma04141	Protein processing in endoplasmic reticulum	2
gma04144	Endocytosis	2
gma00510	N-Glycan biosynthesis	2
gma00513	Various types of N-glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04626	Plant-pathogen interaction	4
sly04075	Plant hormone signal transduction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04120	Ubiquitin mediated proteolysis	2
bra03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04075	Plant hormone signal transduction	2
vvi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04075	Plant hormone signal transduction	2
vvi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04148	Efferocytosis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04016	MAPK signaling pathway - plant	4
bna04626	Plant-pathogen interaction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04141	Protein processing in endoplasmic reticulum	3
sot03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre04144	Endocytosis	2
cre04145	Phagosome	2
cre04148	Efferocytosis	2

Expression

Expression pattern

Entrez Gene ID^*

100284488

100194121

110432262

110435737

4329759

123121689

123086136

123448344

123442512

100834851

100838458

836366

100812120

101260808

103874679

100250124

100256824

18104586

7492938

11437485

11421871

107916558

125591300

102604544

102584648

102615152

102627455

107832834

5723150

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 103636408 (zma-u.5 coexpression data)

Top 50 enrichment test to 103636408 (zma-u.5 coexpression data)


Species	zma	osa	ath	gma	sly	vvi	ppo	mtr	hvu	bna	cit	bra	ghi	sbi	bdi	nta	tae	cre	sot
Paralog	6	3	2	3	2	3	3	3	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 103636408 (zma-u.5 coexpression data)

Top 50 enrichment test to 103636408 (zma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**