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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100258825   GTPase LSG1-2 
 vvi-r.5   100258825   GTPase LSG1-2 
 vvi-m.5   100258825   GTPase LSG1-2 
 ath-u.5   AT2G27200   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 ath-u.5   AT1G08410   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 gma-u.5   100817523   GTPase LSG1-2 
 gma-u.5   100815023   GTPase LSG1-2 
 gma-u.5   100778137   GTPase LSG1-2 
 bra-r.6   103836394   GTPase LSG1-2 
 bra-r.6   103864762   GTPase LSG1-1 
 ppo-u.5   7491116   GTPase LSG1-2 
 mtr-u.5   11444051   GTPase LSG1-1 
 ghi-r.1   107900816   GTPase LSG1-2 
 ghi-r.1   107889227   GTPase LSG1-2 
 bna-r.1   106362310   GTPase LSG1-2-like 
 bna-r.1   106446762   GTPase LSG1-1 
 bna-r.1   106411413   GTPase LSG1-1-like 
 cit-r.1   102631094   GTPase LSG1-1-like 
 sly-u.5   101261781   GTPase LSG1-2 
 sot-r.1   102580337   GTPase LSG1-2 
 nta-r.1   107812208   GTPase LSG1-2 
 nta-r.1   107795579   GTPase LSG1-2 
 osa-u.5   4333574   GTPase LSG1-2 
 osa-u.5   4352809   GTPase LSG1-2 
 zma-u.5   100501989   uncharacterized LOC100501989 
 tae-r.2   123104899   GTPase LSG1-2 
 tae-r.2   123110227   GTPase LSG1-1 
 tae-r.2   123113190   GTPase LSG1-2 
 hvu-r.1   123395560   GTPase LSG1-1-like 
 hvu-r.1   123452103   GTPase LSG1-2-like 
 sbi-r.1   8071482   GTPase LSG1-2 
 bdi-r.1   100831003   GTPase LSG1-2 
 bdi-r.1   100829536   GTPase LSG1-1 
 cre-r.1   CHLRE_16g680944v5   uncharacterized protein 

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Top 50 coexpressed genes to 100258825 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100258825 (vvi-u.5 coexpression data)

CoexMap"100258825"


vviLOC100258825 | Entrez gene ID : 100258825      
Species vvi ath gma bra ppo mtr ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 2 3 2 1 1 2 3 1 1 1 2 2 1 3 2 1 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG vvi03008 [list] [network] Ribosome biogenesis in eukaryotes (287 genes)
GO BP
GO CC
GO:0005829 [list] [network] cytosol  (779 genes)  IEA  
GO MF
GO:0003924 [list] [network] GTPase activity  (170 genes)  IEA  
GO:0005525 [list] [network] GTP binding  (196 genes)  IEA  
Protein XP_002264570.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cyto 4,  cyto_nucl 4  (predict for XP_002264570.1)
Subcellular
localization
TargetP
other 7,  mito 3  (predict for XP_002264570.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100258825
vvi-r.5
for
100258825
vvi-m.5
for
100258825
ath-u.5
for
AT2G27200
ath-u.5
for
AT1G08410
gma-u.5
for
100817523
gma-u.5
for
100815023
gma-u.5
for
100778137
bra-r.6
for
103836394
bra-r.6
for
103864762
ppo-u.5
for
7491116
mtr-u.5
for
11444051
ghi-r.1
for
107900816
ghi-r.1
for
107889227
bna-r.1
for
106362310
bna-r.1
for
106446762
bna-r.1
for
106411413
cit-r.1
for
102631094
sly-u.5
for
101261781
sot-r.1
for
102580337
nta-r.1
for
107812208
nta-r.1
for
107795579
osa-u.5
for
4333574
osa-u.5
for
4352809
zma-u.5
for
100501989
tae-r.2
for
123104899
tae-r.2
for
123110227
tae-r.2
for
123113190
hvu-r.1
for
123395560
hvu-r.1
for
123452103
sbi-r.1
for
8071482
bdi-r.1
for
100831003
bdi-r.1
for
100829536
cre-r.1
for
CHLRE_16g680944v5


Ortholog ID: 5690
Species vvi ath ath gma gma gma bra bra ppo mtr ghi ghi bna bna bna cit sly sot nta nta osa osa zma tae tae tae hvu hvu sbi bdi bdi cre
Symbol LOC100258825 AT2G27200 AT1G08410 LOC100817523 LOC100778137 LOC100775499 LOC103836394 LOC103864762 LOC7491116 LOC11444051 LOC107900816 LOC107889227 LOC106446762 LOC106411413 LOC106383109 LOC102631094 LOC101261781 LOC102580337 LOC107812208 LOC107795579 LOC4333574 LOC4352809 LOC100501989 LOC123104899 LOC123110227 LOC123122713 LOC123395560 LOC123452103 LOC8071482 LOC100831003 LOC100829536 CHLRE_16g680944v5
Function* GTPase LSG1-2 P-loop containing nucleoside triphosphate hydrolases superfamily protein P-loop containing nucleoside triphosphate hydrolases superfamily protein GTPase LSG1-2 GTPase LSG1-2 GTPase LSG1-2 GTPase LSG1-2 GTPase LSG1-1 GTPase LSG1-2 GTPase LSG1-1 GTPase LSG1-2 GTPase LSG1-2 GTPase LSG1-1 GTPase LSG1-1-like GTPase LSG1-2 GTPase LSG1-1-like GTPase LSG1-2 GTPase LSG1-2 GTPase LSG1-2 GTPase LSG1-2 GTPase LSG1-2 GTPase LSG1-2 uncharacterized LOC100501989 GTPase LSG1-2 GTPase LSG1-1 GTPase LSG1-2 GTPase LSG1-1-like GTPase LSG1-2-like GTPase LSG1-2 GTPase LSG1-2 GTPase LSG1-1 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 2
vvi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00480 Glutathione metabolism 2
ath00052 Galactose metabolism 2
ath00561 Glycerolipid metabolism 2
ath03250 Viral life cycle - HIV-1 2
ath04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 4
ghi03015 mRNA surveillance pathway 4
ghi03008 Ribosome biogenesis in eukaryotes 4
ghi03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 4
ghi03015 mRNA surveillance pathway 4
ghi03008 Ribosome biogenesis in eukaryotes 4
ghi03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 2
bna04144 Endocytosis 2
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 2
bna04144 Endocytosis 2
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 3
bna03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 7
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
nta03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 7
nta03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 3
osa03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 3
osa03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 3
zma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
tae03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
tae03008 Ribosome biogenesis in eukaryotes 3
tae00030 Pentose phosphate pathway 3
tae00230 Purine metabolism 3
tae01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 4
hvu03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 2
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100258825 817262 837361 100817523 100778137 100775499 103836394 103864762 7491116 11444051 107900816 107889227 106446762 106411413 106383109 102631094 101261781 102580337 107812208 107795579 4333574 4352809 100501989 123104899 123110227 123122713 123395560 123452103 8071482 100831003 100829536 5724819
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