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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100259083   putative pentatricopeptide repeat-containing protein At1g19290 
 vvi-r.5   100259083   putative pentatricopeptide repeat-containing protein At1g19290 
 ath-u.5   AT1G19290   Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5   100811926   putative pentatricopeptide repeat-containing protein At1g19290 
 ppo-u.5   18104994   putative pentatricopeptide repeat-containing protein At1g19290 
 mtr-u.5   11418300   putative pentatricopeptide repeat-containing protein At1g19290 
 sly-u.5   101265435   putative pentatricopeptide repeat-containing protein At1g19290 
 osa-u.5   9271043   putative pentatricopeptide repeat-containing protein At1g19290 
 zma-u.5   113509068   uncharacterized LOC113509068 

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Top 50 coexpressed genes to 100259083 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100259083 (vvi-u.5 coexpression data)

CoexMap"100259083"


vviLOC100259083 | Entrez gene ID : 100259083      
Species vvi ath gma ppo mtr sly osa zma hvu sot tae nta bra cit ghi bna bdi sbi cre
Paralog 2 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4232 genes)  IEA  
Protein XP_002281859.2 [sequence] [blastp]
XP_010664643.1 [sequence] [blastp]
XP_059590792.1 [sequence] [blastp]
XP_059590793.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  mito 3,  cyto_mito 2,  nucl 1,  cyto 1,  plas 1,  E.R. 1,  cyto_nucl 1,  nucl_plas 1,  E.R._plas 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_002281859.2)
chlo 4,  mito 3,  cyto_mito 2,  nucl 1,  cyto 1,  plas 1,  E.R. 1,  cyto_nucl 1,  nucl_plas 1,  E.R._plas 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_010664643.1)
chlo 4,  mito 3,  cyto_mito 2,  nucl 1,  cyto 1,  plas 1,  E.R. 1,  cyto_nucl 1,  nucl_plas 1,  E.R._plas 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_059590792.1)
chlo 4,  mito 3,  cyto_mito 2,  nucl 1,  cyto 1,  plas 1,  E.R. 1,  cyto_nucl 1,  nucl_plas 1,  E.R._plas 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_059590793.1)
Subcellular
localization
TargetP
mito 8  (predict for XP_002281859.2)
mito 8  (predict for XP_010664643.1)
mito 8  (predict for XP_059590792.1)
mito 8  (predict for XP_059590793.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100259083

.
vvi-r.5
for
100259083

.
ath-u.5
for
AT1G19290

.
gma-u.5
for
100811926

.
ppo-u.5
for
18104994

.
mtr-u.5
for
11418300

.
sly-u.5
for
101265435

.
osa-u.5
for
9271043

.
zma-u.5
for
113509068

.


Ortholog ID: 11474
Species ath gma sly osa zma bra vvi ppo mtr hvu ghi bna bna sbi sot cit bdi nta nta
Symbol AT1G19290 LOC100811926 LOC101265435 LOC9271043 LOC113509068 LOC103835853 LOC100259083 LOC18104994 LOC11418300 LOC123404110 LOC107905394 LOC106449492 LOC106361957 LOC8061562 LOC102593990 LOC102617942 LOC104583176 LOC107802721 LOC107789526
Function* Pentatricopeptide repeat (PPR) superfamily protein putative pentatricopeptide repeat-containing protein At1g19290 putative pentatricopeptide repeat-containing protein At1g19290 putative pentatricopeptide repeat-containing protein At1g19290 uncharacterized LOC113509068 putative pentatricopeptide repeat-containing protein At1g19290 putative pentatricopeptide repeat-containing protein At1g19290 putative pentatricopeptide repeat-containing protein At1g19290 putative pentatricopeptide repeat-containing protein At1g19290 putative pentatricopeptide repeat-containing protein At1g19290 putative pentatricopeptide repeat-containing protein At1g19290 putative pentatricopeptide repeat-containing protein At1g19290 putative pentatricopeptide repeat-containing protein At1g19290 putative pentatricopeptide repeat-containing protein At1g19290 putative pentatricopeptide repeat-containing protein At1g19290 putative pentatricopeptide repeat-containing protein At1g19290 putative pentatricopeptide repeat-containing protein At1g19290 uncharacterized LOC107802721 uncharacterized LOC107789526
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 4
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03018 RNA degradation 2
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00071 Fatty acid degradation 2
cit00280 Valine, leucine and isoleucine degradation 2
cit01212 Fatty acid metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 838511 100811926 101265435 9271043 113509068 103835853 100259083 18104994 11418300 123404110 107905394 106449492 106361957 8061562 102593990 102617942 104583176 107802721 107789526
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