Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   11418300   putative pentatricopeptide repeat-containing protein At1g19290 
 mtr-r.5   11418300   putative pentatricopeptide repeat-containing protein At1g19290 
 gma-u.5   100811926   putative pentatricopeptide repeat-containing protein At1g19290 
 ppo-u.5   18104994   putative pentatricopeptide repeat-containing protein At1g19290 
 ath-u.5   AT1G19290   Pentatricopeptide repeat (PPR) superfamily protein 
 bra-r.6   103835853   putative pentatricopeptide repeat-containing protein At1g19290 
 vvi-u.5   100259083   putative pentatricopeptide repeat-containing protein At1g19290 
 ghi-r.1   107905394   putative pentatricopeptide repeat-containing protein At1g19290 
 bna-r.1   106361957   putative pentatricopeptide repeat-containing protein At1g19290 
 bna-r.1   106449492   putative pentatricopeptide repeat-containing protein At1g19290 
 cit-r.1   102617942   putative pentatricopeptide repeat-containing protein At1g19290 
 sly-u.5   101265435   putative pentatricopeptide repeat-containing protein At1g19290 
 sot-r.1   102593990   putative pentatricopeptide repeat-containing protein At1g19290 
 nta-r.1   107802721   uncharacterized LOC107802721 
 nta-r.1   107789526   uncharacterized LOC107789526 
 osa-u.5   9271043   putative pentatricopeptide repeat-containing protein At1g19290 
 zma-u.5   113509068   uncharacterized LOC113509068 
 hvu-r.1   123404110   putative pentatricopeptide repeat-containing protein At1g19290 
 sbi-r.1   8061562   putative pentatricopeptide repeat-containing protein At1g19290 
 bdi-r.1   104583176   putative pentatricopeptide repeat-containing protein At1g19290 

close


Top 50 coexpressed genes to 11418300 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 11418300 (mtr-u.5 coexpression data)

CoexMap"11418300"


mtrLOC11418300 | Entrez gene ID : 11418300      
Species mtr gma ppo ath bra vvi ghi bna cit sly sot nta osa zma hvu sbi bdi cre tae
Paralog 2 1 1 1 1 1 1 2 1 1 1 2 1 1 1 1 1 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003729 [list] [network] mRNA binding  (294 genes)  IEA  
GO:0005515 [list] [network] protein binding  (5045 genes)  IEA  
Protein XP_003595590.1 [sequence] [blastp]
XP_024633286.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 6,  chlo_mito 5,  chlo 4,  cyto_mito 3  (predict for XP_003595590.1)
mito 6,  chlo_mito 5,  chlo 4,  cyto_mito 3  (predict for XP_024633286.1)
Subcellular
localization
TargetP
mito 7  (predict for XP_003595590.1)
mito 7  (predict for XP_024633286.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
11418300
mtr-r.5
for
11418300
gma-u.5
for
100811926
ppo-u.5
for
18104994
ath-u.5
for
AT1G19290
bra-r.6
for
103835853
vvi-u.5
for
100259083
ghi-r.1
for
107905394
bna-r.1
for
106361957
bna-r.1
for
106449492
cit-r.1
for
102617942
sly-u.5
for
101265435
sot-r.1
for
102593990
nta-r.1
for
107802721
nta-r.1
for
107789526
osa-u.5
for
9271043
zma-u.5
for
113509068
hvu-r.1
for
123404110
sbi-r.1
for
8061562
bdi-r.1
for
104583176


Ortholog ID: 11474
Species mtr gma ppo ath bra vvi ghi bna bna cit sly sot nta nta osa zma hvu sbi bdi
Symbol LOC11418300 LOC100811926 LOC18104994 AT1G19290 LOC103835853 LOC100259083 LOC107905394 LOC106361957 LOC106449492 LOC102617942 LOC101265435 LOC102593990 LOC107802721 LOC107789526 LOC9271043 LOC113509068 LOC123404110 LOC8061562 LOC104583176
Function* putative pentatricopeptide repeat-containing protein At1g19290 putative pentatricopeptide repeat-containing protein At1g19290 putative pentatricopeptide repeat-containing protein At1g19290 Pentatricopeptide repeat (PPR) superfamily protein putative pentatricopeptide repeat-containing protein At1g19290 putative pentatricopeptide repeat-containing protein At1g19290 putative pentatricopeptide repeat-containing protein At1g19290 putative pentatricopeptide repeat-containing protein At1g19290 putative pentatricopeptide repeat-containing protein At1g19290 putative pentatricopeptide repeat-containing protein At1g19290 putative pentatricopeptide repeat-containing protein At1g19290 putative pentatricopeptide repeat-containing protein At1g19290 uncharacterized LOC107802721 uncharacterized LOC107789526 putative pentatricopeptide repeat-containing protein At1g19290 uncharacterized LOC113509068 putative pentatricopeptide repeat-containing protein At1g19290 putative pentatricopeptide repeat-containing protein At1g19290 putative pentatricopeptide repeat-containing protein At1g19290
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 4
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00071 Fatty acid degradation 2
cit00280 Valine, leucine and isoleucine degradation 2
cit01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03018 RNA degradation 2
hvu03013 Nucleocytoplasmic transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 11418300 100811926 18104994 838511 103835853 100259083 107905394 106361957 106449492 102617942 101265435 102593990 107802721 107789526 9271043 113509068 123404110 8061562 104583176
The preparation time of this page was 0.1 [sec].