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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100260408   putative E3 ubiquitin-protein ligase LIN-1 
 vvi-r.5   100260408   putative E3 ubiquitin-protein ligase LIN-1 
 gma-u.5   100820501   putative E3 ubiquitin-protein ligase LIN-1 
 ppo-u.5   7463607   putative E3 ubiquitin-protein ligase LIN-2 
 ppo-u.5   7455762   putative E3 ubiquitin-protein ligase LIN-2 
 mtr-u.5   11414149   putative E3 ubiquitin-protein ligase LIN 
 sly-u.5   101265762   putative E3 ubiquitin-protein ligase LIN-2 
 osa-u.5   9268164   putative E3 ubiquitin-protein ligase LIN-2 

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Top 50 coexpressed genes to 100260408 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100260408 (vvi-u.5 coexpression data)

CoexMap"100260408"


vviLOC100260408 | Entrez gene ID : 100260408    
Species vvi gma ppo mtr sly osa bdi hvu bra cit bna ath sbi ghi sot nta cre tae zma
Paralog 2 1 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016567 [list] [network] protein ubiquitination  (272 genes)  IEA  
GO CC
GO MF
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (280 genes)  IEA  
Protein XP_002283306.2 [sequence] [blastp]
XP_010651317.1 [sequence] [blastp]
XP_019076368.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  nucl 3  (predict for XP_002283306.2)
nucl 6,  cyto 3,  nucl_plas 3  (predict for XP_010651317.1)
nucl 6,  cyto 3,  nucl_plas 3  (predict for XP_019076368.1)
Subcellular
localization
TargetP
chlo 4,  mito 3  (predict for XP_002283306.2)
chlo 5,  other 3  (predict for XP_010651317.1)
chlo 5,  other 3  (predict for XP_019076368.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100260408
vvi-r.5
for
100260408
gma-u.5
for
100820501
ppo-u.5
for
7463607
ppo-u.5
for
7455762
mtr-u.5
for
11414149
sly-u.5
for
101265762
osa-u.5
for
9268164


Ortholog ID: 11831
Species vvi gma ppo ppo mtr ghi ghi sly sot nta nta osa tae hvu bdi
Symbol LOC100260408 LOC100820501 LOC7455762 LOC7463607 LOC11414149 LOC107901995 LOC107893937 LOC101265762 LOC102591146 LOC107776110 LOC107812306 LOC9268164 LOC123046695 LOC123427842 LOC100821474
Function* putative E3 ubiquitin-protein ligase LIN-1 putative E3 ubiquitin-protein ligase LIN-1 putative E3 ubiquitin-protein ligase LIN-2 putative E3 ubiquitin-protein ligase LIN-2 putative E3 ubiquitin-protein ligase LIN putative E3 ubiquitin-protein ligase LIN-1 putative E3 ubiquitin-protein ligase LIN-1 putative E3 ubiquitin-protein ligase LIN-2 uncharacterized LOC102591146 putative E3 ubiquitin-protein ligase LIN-1 putative E3 ubiquitin-protein ligase LIN putative E3 ubiquitin-protein ligase LIN-2 uncharacterized LOC123046695 uncharacterized LOC123427842 putative E3 ubiquitin-protein ligase LIN-1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04142 Lysosome 3
gma00562 Inositol phosphate metabolism 2
gma04070 Phosphatidylinositol signaling system 2
gma04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03022 Basal transcription factors 2
nta03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03022 Basal transcription factors 2
nta03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00561 Glycerolipid metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100260408 100820501 7455762 7463607 11414149 107901995 107893937 101265762 102591146 107776110 107812306 9268164 123046695 123427842 100821474
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