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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7463607   putative E3 ubiquitin-protein ligase LIN-2 
 ppo-r.4   7463607   putative E3 ubiquitin-protein ligase LIN-2 
 ppo-m.4   7463607   putative E3 ubiquitin-protein ligase LIN-2 
 ppo-u.5   7455762   putative E3 ubiquitin-protein ligase LIN-2 
 gma-u.5   100820501   putative E3 ubiquitin-protein ligase LIN-1 
 mtr-u.5   11414149   putative E3 ubiquitin-protein ligase LIN 
 vvi-u.5   100260408   putative E3 ubiquitin-protein ligase LIN-1 
 sly-u.5   101265762   putative E3 ubiquitin-protein ligase LIN-2 
 osa-u.5   9268164   putative E3 ubiquitin-protein ligase LIN-2 

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Top 50 coexpressed genes to 7463607 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7463607 (ppo-u.5 coexpression data)

CoexMap"7463607"


ppoLOC7463607 | Entrez gene ID : 7463607    
Species ppo gma mtr vvi sly osa sbi nta bra cre hvu cit bdi sot zma tae ath bna ghi
Paralog 4 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016567 [list] [network] protein ubiquitination  (417 genes)  IEA  
GO CC
GO MF
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (401 genes)  IEA  
Protein XP_024452745.2 [sequence] [blastp]
XP_024452746.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cyto 4,  cyto_nucl 4  (predict for XP_024452745.2)
nucl 4,  cyto 4,  cyto_nucl 4  (predict for XP_024452746.2)
Subcellular
localization
TargetP
other 3  (predict for XP_024452745.2)
other 3  (predict for XP_024452746.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7463607

.
ppo-r.4
for
7463607

.
ppo-m.4
for
7463607

.
ppo-u.5
for
7455762

.
gma-u.5
for
100820501

.
mtr-u.5
for
11414149

.
vvi-u.5
for
100260408

.
sly-u.5
for
101265762

.
osa-u.5
for
9268164

.


Ortholog ID: 11831
Species gma sly osa vvi ppo ppo mtr tae hvu ghi ghi sot bdi nta nta
Symbol LOC100820501 LOC101265762 LOC9268164 LOC100260408 LOC7455762 LOC7463607 LOC11414149 LOC123046695 LOC123427842 LOC107901995 LOC107893937 LOC102591146 LOC100821474 LOC107776110 LOC107812306
Function* putative E3 ubiquitin-protein ligase LIN-1 putative E3 ubiquitin-protein ligase LIN-2 putative E3 ubiquitin-protein ligase LIN-2 putative E3 ubiquitin-protein ligase LIN-1 putative E3 ubiquitin-protein ligase LIN-2 putative E3 ubiquitin-protein ligase LIN-2 putative E3 ubiquitin-protein ligase LIN uncharacterized LOC123046695 uncharacterized LOC123427842 putative E3 ubiquitin-protein ligase LIN-1 putative E3 ubiquitin-protein ligase LIN-1 uncharacterized LOC102591146 putative E3 ubiquitin-protein ligase LIN-1 putative E3 ubiquitin-protein ligase LIN-1 putative E3 ubiquitin-protein ligase LIN
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04142 Lysosome 3
gma00562 Inositol phosphate metabolism 2
gma04070 Phosphatidylinositol signaling system 2
gma04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03022 Basal transcription factors 2
nta03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03022 Basal transcription factors 2
nta03420 Nucleotide excision repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100820501 101265762 9268164 100260408 7455762 7463607 11414149 123046695 123427842 107901995 107893937 102591146 100821474 107776110 107812306
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