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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100260812   uncharacterized LOC100260812 
 vvi-r.5   100260812   uncharacterized LOC100260812 
 vvi-m.5   100260812   uncharacterized LOC100260812 
 ath-u.5   AT1G29320   Transducin/WD40 repeat-like superfamily protein 
 gma-u.5   100816020   WD repeat-containing protein 74 
 gma-u.5   100791506   WD repeat-containing protein 74 
 ppo-u.5   7454539   uncharacterized LOC7454539 
 ppo-u.5   7454695   uncharacterized LOC7454695 
 mtr-u.5   25499511   WD repeat-containing protein 74 
 sly-u.5   101255904   uncharacterized LOC101255904 
 osa-u.5   4343330   uncharacterized LOC4343330 
 zma-u.5   103647701   WD repeat-containing protein 74 
 zma-u.5   100272883   Transducin/WD40 repeat-like superfamily protein 

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Top 50 coexpressed genes to 100260812 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100260812 (vvi-u.5 coexpression data)

CoexMap"100260812"


vviLOC100260812 | Entrez gene ID : 100260812      
Species vvi ath gma ppo mtr sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 3 1 2 2 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0042273 [list] [network] ribosomal large subunit biogenesis  (79 genes)  IEA  
GO CC
GO:0030687 [list] [network] preribosome, large subunit precursor  (26 genes)  IEA  
GO:0005730 [list] [network] nucleolus  (170 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (4232 genes)  IEA  
Protein XP_002277288.1 [sequence] [blastp]
XP_010663266.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  nucl 1,  cyto 1,  cyto_nucl 1,  mito 1,  plas 1,  extr 1,  cysk 1,  cyto_pero 1,  cysk_plas 1,  mito_plas 1,  cyto_E.R. 1  (predict for XP_002277288.1)
chlo 3,  mito 2,  nucl 1,  extr 1,  mito_plas 1  (predict for XP_010663266.1)
Subcellular
localization
TargetP
other 6  (predict for XP_002277288.1)
other 5,  mito 4  (predict for XP_010663266.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100260812
vvi-r.5
for
100260812
vvi-m.5
for
100260812
ath-u.5
for
AT1G29320
gma-u.5
for
100816020
gma-u.5
for
100791506
ppo-u.5
for
7454539
ppo-u.5
for
7454695
mtr-u.5
for
25499511
sly-u.5
for
101255904
osa-u.5
for
4343330
zma-u.5
for
103647701
zma-u.5
for
100272883


Ortholog ID: 7052
Species vvi ath gma gma bra bra ppo ppo mtr ghi ghi bna bna cit sly sot nta nta osa zma zma tae tae hvu sbi bdi cre
Symbol LOC100260812 AT1G29320 LOC100816020 LOC100791506 LOC103832143 LOC103835280 LOC7454539 LOC7454695 LOC25499511 LOC107931503 LOC107921779 LOC106397469 LOC106361655 LOC102627757 LOC101255904 LOC102590324 LOC107817314 LOC107820917 LOC4343330 LOC103647701 LOC100272883 LOC123052587 LOC123188531 LOC123425952 LOC8077484 LOC100831318 CHLRE_17g718650v5
Function* uncharacterized LOC100260812 Transducin/WD40 repeat-like superfamily protein WD repeat-containing protein 74 WD repeat-containing protein 74 WD repeat-containing protein 74 WD repeat-containing protein 74 uncharacterized LOC7454539 uncharacterized LOC7454695 WD repeat-containing protein 74 WD repeat-containing protein 74 WD repeat-containing protein 74 WD repeat-containing protein 74-like WD repeat-containing protein 74-like uncharacterized LOC102627757 uncharacterized LOC101255904 WD repeat-containing protein 74 uncharacterized LOC107817314 uncharacterized LOC107820917 uncharacterized LOC4343330 WD repeat-containing protein 74 Transducin/WD40 repeat-like superfamily protein WD repeat-containing protein 74 WD repeat-containing protein DDB_G0290555 WD repeat-containing protein 74 WD repeat-containing protein 74 WD repeat-containing protein 74 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 4
cit03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 6
nta03030 DNA replication 2
nta03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 6
tae00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 8
tae03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100260812 839806 100816020 100791506 103832143 103835280 7454539 7454695 25499511 107931503 107921779 106397469 106361655 102627757 101255904 102590324 107817314 107820917 4343330 103647701 100272883 123052587 123188531 123425952 8077484 100831318 66057015
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