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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_17g718650v5   uncharacterized protein 
 ath-u.5   AT1G29320   Transducin/WD40 repeat-like superfamily protein 
 gma-u.5   100816020   WD repeat-containing protein 74 
 gma-u.5   100791506   WD repeat-containing protein 74 
 sly-u.5   101255904   uncharacterized LOC101255904 
 osa-u.5   4343330   uncharacterized LOC4343330 
 zma-u.5   103647701   WD repeat-containing protein 74 
 zma-u.5   100272883   Transducin/WD40 repeat-like superfamily protein 
 vvi-u.5   100260812   uncharacterized LOC100260812 
 ppo-u.5   7454695   uncharacterized LOC7454695 
 ppo-u.5   7454539   uncharacterized LOC7454539 
 mtr-u.5   25499511   WD repeat-containing protein 74 

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Top 50 coexpressed genes to CHLRE_17g718650v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_17g718650v5 (cre-r.1 coexpression data)

CoexMap"66057015"


creCHLRE_17g718650v5 | Entrez gene ID : 66057015    
Species cre ath gma sly osa zma vvi ppo mtr sbi nta bra hvu cit bdi sot tae bna ghi
Paralog 1 1 2 1 1 2 1 2 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0042273 [list] [network] ribosomal large subunit biogenesis  (52 genes)  IEA  
GO CC
GO:0030687 [list] [network] preribosome, large subunit precursor  (23 genes)  IEA  
GO:0005730 [list] [network] nucleolus  (152 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (1927 genes)  IEA  
Protein XP_042914676.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  nucl_plas 5,  plas 1  (predict for XP_042914676.1)
Subcellular
localization
TargetP
other 8  (predict for XP_042914676.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_17g718650v5

.
ath-u.5
for
AT1G29320

.
gma-u.5
for
100816020

.
gma-u.5
for
100791506

.
sly-u.5
for
101255904

.
osa-u.5
for
4343330

.
zma-u.5
for
103647701

.
zma-u.5
for
100272883

.
vvi-u.5
for
100260812

.
ppo-u.5
for
7454695

.
ppo-u.5
for
7454539

.
mtr-u.5
for
25499511

.


Ortholog ID: 7052
Species ath gma gma sly osa zma zma bra bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT1G29320 LOC100816020 LOC100791506 LOC101255904 LOC4343330 LOC103647701 LOC100272883 LOC103832143 LOC103835280 LOC100260812 LOC7454539 LOC7454695 LOC25499511 LOC123052587 LOC123188531 LOC123425952 LOC107931503 LOC107921779 LOC106397469 LOC106361655 CHLRE_17g718650v5 LOC8077484 LOC102590324 LOC102627757 LOC100831318 LOC107817314 LOC107820917
Function* Transducin/WD40 repeat-like superfamily protein WD repeat-containing protein 74 WD repeat-containing protein 74 uncharacterized LOC101255904 uncharacterized LOC4343330 WD repeat-containing protein 74 Transducin/WD40 repeat-like superfamily protein WD repeat-containing protein 74 WD repeat-containing protein 74 uncharacterized LOC100260812 uncharacterized LOC7454539 uncharacterized LOC7454695 WD repeat-containing protein 74 WD repeat-containing protein 74 WD repeat-containing protein DDB_G0290555 WD repeat-containing protein 74 WD repeat-containing protein 74 WD repeat-containing protein 74 WD repeat-containing protein 74-like WD repeat-containing protein 74-like uncharacterized protein WD repeat-containing protein 74 WD repeat-containing protein 74 uncharacterized LOC102627757 WD repeat-containing protein 74 uncharacterized LOC107817314 uncharacterized LOC107820917
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 6
tae00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 8
tae03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 4
cit03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 6
nta03030 DNA replication 2
nta03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 839806 100816020 100791506 101255904 4343330 103647701 100272883 103832143 103835280 100260812 7454539 7454695 25499511 123052587 123188531 123425952 107931503 107921779 106397469 106361655 66057015 8077484 102590324 102627757 100831318 107817314 107820917
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