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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT1G50270   Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5   100819113   pentatricopeptide repeat-containing protein At1g50270 
 mtr-u.5   25492816   pentatricopeptide repeat-containing protein At1g50270 
 sly-u.5   101253949   pentatricopeptide repeat-containing protein At1g50270 

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Top 50 coexpressed genes to AT1G50270 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT1G50270 (ath-u.5 coexpression data)

CoexMap"100263102"


vviLOC100263102 | Entrez gene ID : 100263102      
Species ath gma mtr sly sbi nta bra osa cre cit vvi ppo hvu bdi sot zma tae bna ghi
Paralog 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (500 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1286 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4232 genes)  IEA  
Protein XP_002270866.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  chlo 2,  mito 1,  plas 1,  mito_plas 1  (predict for XP_002270866.1)
Subcellular
localization
TargetP
other 4,  mito 3  (predict for XP_002270866.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ath-u.5
for
AT1G50270

.
gma-u.5
for
100819113

.
mtr-u.5
for
25492816

.
sly-u.5
for
101253949

.


Ortholog ID: 15241
Species ath gma sly mtr ghi ghi sot nta nta
Symbol AT1G50270 LOC100819113 LOC101253949 LOC25492816 LOC107903942 LOC107955710 LOC107061198 LOC107790084 LOC107800534
Function* Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At1g50270 pentatricopeptide repeat-containing protein At1g50270 pentatricopeptide repeat-containing protein At1g50270 pentatricopeptide repeat-containing protein At1g50270 pentatricopeptide repeat-containing protein At1g50270 pentatricopeptide repeat-containing protein At1g50270 pentatricopeptide repeat-containing protein At1g50270-like pentatricopeptide repeat-containing protein At1g50270-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
nta03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
nta03008 Ribosome biogenesis in eukaryotes 2
nta04141 Protein processing in endoplasmic reticulum 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 841449 100819113 101253949 25492816 107903942 107955710 107061198 107790084 107800534
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