ATTED-II : GeneCoexpression result

Species	Gene	Description
vvi-u.5	100264926	T-complex protein 1 subunit gamma
vvi-r.5	100264926	T-complex protein 1 subunit gamma
vvi-u.5	100255417	T-complex protein 1 subunit gamma
ath-u.5	AT5G26360	TCP-1/cpn60 chaperonin family protein
gma-u.5	100813370	T-complex protein 1 subunit gamma
gma-u.5	100802143	T-complex protein 1 subunit gamma
gma-u.5	100778141	T-complex protein 1 subunit gamma
ppo-u.5	7458880	T-complex protein 1 subunit gamma
ppo-u.5	18109955	T-complex protein 1 subunit gamma
ppo-u.5	7472582	T-complex protein 1 subunit gamma
mtr-u.5	11446804	T-complex protein 1 subunit gamma
sly-u.5	101246428	T-complex protein 1 subunit gamma
osa-u.5	4328872	T-complex protein 1 subunit gamma
osa-u.5	4341219	T-complex protein 1 subunit gamma
zma-u.5	103654781	T-complex protein 1 subunit gamma
zma-u.5	100285961	uncharacterized LOC100285961

Annotation

functional annotation

KEGG

GO BP

GO:0006457 [list] [network] protein folding

(180 genes)

IEA

GO CC

GO:0005832 [list] [network] chaperonin-containing T-complex

(12 genes)

IEA

GO MF

GO:0140662 [list] [network] ATP-dependent protein folding chaperone	(51 genes)	IEA
GO:0051082 [list] [network] unfolded protein binding	(126 genes)	IEA
GO:0016887 [list] [network] ATP hydrolysis activity	(487 genes)	IEA
GO:0005524 [list] [network] ATP binding	(2120 genes)	IEA

Protein

XP_002268799.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 6, chlo 1, pero 1, nucl 1, mito 1

(predict for XP_002268799.1)

Subcellular
localization
TargetP

other 5

(predict for XP_002268799.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	vvi-u.5 for 100264926	vvi-r.5 for 100264926	vvi-u.5 for 100255417	ath-u.5 for AT5G26360	gma-u.5 for 100813370	gma-u.5 for 100802143	gma-u.5 for 100778141	ppo-u.5 for 7458880	ppo-u.5 for 18109955	ppo-u.5 for 7472582	mtr-u.5 for 11446804	sly-u.5 for 101246428	osa-u.5 for 4328872	osa-u.5 for 4341219	zma-u.5 for 103654781	zma-u.5 for 100285961

Ortholog

Ortholog ID: 5846

Species

vvi

ath

gma

bra

ppo

mtr

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

T-complex protein 1 subunit gamma

TCP-1/cpn60 chaperonin family protein

T-complex protein 1 subunit gamma

T-complex protein 1 subunit gamma-like

T-complex protein 1 subunit gamma

uncharacterized LOC100285961

T-complex protein 1 subunit gamma

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03018	RNA degradation	5
vvi04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00970	Aminoacyl-tRNA biosynthesis	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	8
gma03013	Nucleocytoplasmic transport	2
gma00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04120	Ubiquitin mediated proteolysis	2
ppo00020	Citrate cycle (TCA cycle)	2
ppo01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03008	Ribosome biogenesis in eukaryotes	2
mtr03015	mRNA surveillance pathway	2
mtr00970	Aminoacyl-tRNA biosynthesis	2
mtr03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00230	Purine metabolism	4
ghi01232	Nucleotide metabolism	4
ghi03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00230	Purine metabolism	4
ghi01232	Nucleotide metabolism	4
ghi03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03040	Spliceosome	4
bna03013	Nucleocytoplasmic transport	2
bna03015	mRNA surveillance pathway	2
bna04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03040	Spliceosome	5
bna04120	Ubiquitin mediated proteolysis	3
bna03013	Nucleocytoplasmic transport	2
bna03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00250	Alanine, aspartate and glutamate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03018	RNA degradation	4
sly03008	Ribosome biogenesis in eukaryotes	3
sly04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03040	Spliceosome	2
sot04626	Plant-pathogen interaction	2
sot03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03030	DNA replication	2
nta03410	Base excision repair	2
nta03420	Nucleotide excision repair	2
nta03430	Mismatch repair	2
nta00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00970	Aminoacyl-tRNA biosynthesis	3
nta03030	DNA replication	2
nta03410	Base excision repair	2
nta03420	Nucleotide excision repair	2
nta03430	Mismatch repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa01230	Biosynthesis of amino acids	4
osa00340	Histidine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03018	RNA degradation	3
tae03040	Spliceosome	2
tae04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03040	Spliceosome	2
tae04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03010	Ribosome	2
hvu00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03010	Ribosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03013	Nucleocytoplasmic transport	3
cre03082	ATP-dependent chromatin remodeling	2

Expression

Expression pattern

Entrez Gene ID^*

100255417

100264926

832705

100813370

100802143

103850000

103859128

18109955

7458880

11446804

107897176

107914458

125606980

106388853

102616859

102606669

101246428

102578754

107804248

107821431

4328872

4341219

100285961

103654781

123147902

123156094

123413238

8054213

100835308

5716089

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100264926 (vvi-u.5 coexpression data)

Top 50 enrichment test to 100264926 (vvi-u.5 coexpression data)


Species	vvi	ath	gma	ppo	mtr	sly	osa	zma	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	3	1	3	3	1	1	2	2	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100264926 (vvi-u.5 coexpression data)

Top 50 enrichment test to 100264926 (vvi-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**