ATTED-II : GeneCoexpression result

Species	Gene	Description
vvi-u.5	100267198	probable CoA ligase CCL7
vvi-r.5	100267198	probable CoA ligase CCL7
ath-u.5	AT4G05160	AMP-dependent synthetase and ligase family protein
gma-u.5	100808944	4-coumarate--CoA ligase-like 7
gma-u.5	4CL	4-coumarate--CoA ligase-like 7-like
ppo-u.5	18107395	probable CoA ligase CCL7
ppo-u.5	7494541	probable CoA ligase CCL7
mtr-u.5	25492399	4-coumarate--CoA ligase-like 7
mtr-u.5	25487863	4-coumarate--CoA ligase-like 7
sly-u.5	101249706	probable CoA ligase CCL7
osa-u.5	4331650	4-coumarate--CoA ligase-like 1
zma-u.5	100191850	4-coumarate--CoA ligase-like 7
zma-u.5	100280100	uncharacterized LOC100280100

functional annotation

KEGG

vvi00130 [list] [network] Ubiquinone and other terpenoid-quinone biosynthesis (44 genes)

vvi00940 [list] [network] Phenylpropanoid biosynthesis (156 genes)

GO BP

GO CC

GO MF

GO:0016405 [list] [network] CoA-ligase activity

(26 genes)

IEA

Protein

XP_002276353.1 [sequence] [blastp]

Subcellular
localization
wolf

plas 6, E.R. 2, vacu 1, golg 1

(predict for XP_002276353.1)

Subcellular
localization
TargetP

other 6

(predict for XP_002276353.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	vvi-u.5 for 100267198	vvi-r.5 for 100267198	ath-u.5 for AT4G05160	gma-u.5 for 100808944	gma-u.5 for 4CL	ppo-u.5 for 18107395	ppo-u.5 for 7494541	mtr-u.5 for 25492399	mtr-u.5 for 25487863	sly-u.5 for 101249706	osa-u.5 for 4331650	zma-u.5 for 100191850	zma-u.5 for 100280100

Ortholog ID: 6030

Species

vvi

ath

gma

bra

ppo

mtr

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

4CL

Function^*

probable CoA ligase CCL7

AMP-dependent synthetase and ligase family protein

4-coumarate--CoA ligase-like 7-like

4-coumarate--CoA ligase-like 7

probable CoA ligase CCL7

4-coumarate--CoA ligase-like 7

probable CoA ligase CCL7

4-coumarate--CoA ligase-like 7

putative CoA ligase CCL7

4-coumarate--CoA ligase-like 1

uncharacterized LOC100280100

4-coumarate--CoA ligase-like 7

4-coumarate--CoA ligase-like 1

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath01200	Carbon metabolism	5
ath00020	Citrate cycle (TCA cycle)	4
ath00480	Glutathione metabolism	4
ath01210	2-Oxocarboxylic acid metabolism	4
ath01230	Biosynthesis of amino acids	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00500	Starch and sucrose metabolism	2
gma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00630	Glyoxylate and dicarboxylate metabolism	2
mtr01200	Carbon metabolism	2
mtr04146	Peroxisome	2
mtr00511	Other glycan degradation	2
mtr00195	Photosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr01200	Carbon metabolism	3
mtr00410	beta-Alanine metabolism	2
mtr00630	Glyoxylate and dicarboxylate metabolism	2
mtr00592	alpha-Linolenic acid metabolism	2
mtr04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi01210	2-Oxocarboxylic acid metabolism	5
ghi01230	Biosynthesis of amino acids	5
ghi00290	Valine, leucine and isoleucine biosynthesis	3
ghi00650	Butanoate metabolism	3
ghi00660	C5-Branched dibasic acid metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00130	Ubiquinone and other terpenoid-quinone biosynthesis	4
bna00940	Phenylpropanoid biosynthesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00130	Ubiquinone and other terpenoid-quinone biosynthesis	4
bna00940	Phenylpropanoid biosynthesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit01200	Carbon metabolism	7
cit00710	Carbon fixation by Calvin cycle	6
cit01230	Biosynthesis of amino acids	3
cit00010	Glycolysis / Gluconeogenesis	3
cit00130	Ubiquinone and other terpenoid-quinone biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00130	Ubiquinone and other terpenoid-quinone biosynthesis	3
cit00940	Phenylpropanoid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
sot01210	2-Oxocarboxylic acid metabolism	2
sot01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta01240	Biosynthesis of cofactors	3
nta00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
nta00940	Phenylpropanoid biosynthesis	2
nta03015	mRNA surveillance pathway	2
nta00906	Carotenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta01240	Biosynthesis of cofactors	3
nta00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
nta00940	Phenylpropanoid biosynthesis	2
nta03015	mRNA surveillance pathway	2
nta00740	Riboflavin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa01230	Biosynthesis of amino acids	6
osa00270	Cysteine and methionine metabolism	4
osa00670	One carbon pool by folate	4
osa00940	Phenylpropanoid biosynthesis	2
osa00630	Glyoxylate and dicarboxylate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00270	Cysteine and methionine metabolism	2
zma01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma01240	Biosynthesis of cofactors	3
zma00561	Glycerolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00380	Tryptophan metabolism	3
tae00130	Ubiquinone and other terpenoid-quinone biosynthesis	3
tae00940	Phenylpropanoid biosynthesis	3
tae00052	Galactose metabolism	3
tae00520	Amino sugar and nucleotide sugar metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00380	Tryptophan metabolism	3
tae00130	Ubiquinone and other terpenoid-quinone biosynthesis	3
tae00940	Phenylpropanoid biosynthesis	3
tae00052	Galactose metabolism	3
tae00520	Amino sugar and nucleotide sugar metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00940	Phenylpropanoid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04142	Lysosome	4
sbi04146	Peroxisome	2
sbi00100	Steroid biosynthesis	2

Expression

Expression pattern

Entrez Gene ID^*

100267198

825864

100797843

100808944

103839764

103839765

18107395

7494541

25492399

25487863

107936009

107963914

106349075

106349076

102609336

102609606

101249706

102597265

107797035

107798422

4331650

100280100

100191850

123098443

123084909

123449468

110430512

8063037

100845934

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100267198 (vvi-u.5 coexpression data)

Top 50 enrichment test to 100267198 (vvi-u.5 coexpression data)


Species	vvi	ath	gma	ppo	mtr	sly	osa	zma	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	2	1	2	2	2	1	1	2	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100267198 (vvi-u.5 coexpression data)

Top 50 enrichment test to 100267198 (vvi-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**