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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102609336   probable CoA ligase CCL7 
 cit-r.1   102610430   probable CoA ligase CCL7 
 cit-r.1   102609606   probable CoA ligase CCL7 
 ath-u.5   AT4G05160   AMP-dependent synthetase and ligase family protein 
 bra-r.6   103839765   4-coumarate--CoA ligase-like 7 
 bra-r.6   103839764   4-coumarate--CoA ligase-like 7 
 ghi-r.1   107927154   4-coumarate--CoA ligase-like 7 
 ghi-r.1   107963914   4-coumarate--CoA ligase-like 7 
 ghi-r.1   107936009   4-coumarate--CoA ligase-like 7 
 bna-r.1   106364455   4-coumarate--CoA ligase-like 7 
 bna-r.1   106349075   4-coumarate--CoA ligase-like 7 
 bna-r.1   106366854   4-coumarate--CoA ligase-like 7 
 gma-u.5   100808944   4-coumarate--CoA ligase-like 7 
 gma-u.5   4CL   4-coumarate--CoA ligase-like 7-like 
 vvi-u.5   100267198   probable CoA ligase CCL7 
 ppo-u.5   18107395   probable CoA ligase CCL7 
 ppo-u.5   7494541   probable CoA ligase CCL7 
 mtr-u.5   25492399   4-coumarate--CoA ligase-like 7 
 mtr-u.5   25487863   4-coumarate--CoA ligase-like 7 
 sly-u.5   101249706   probable CoA ligase CCL7 
 sot-r.1   102597265   4-coumarate--CoA ligase-like 7 
 nta-r.1   107798422   putative CoA ligase CCL7 
 nta-r.1   107797035   putative CoA ligase CCL7 
 osa-u.5   4331650   4-coumarate--CoA ligase-like 1 
 zma-u.5   100191850   4-coumarate--CoA ligase-like 7 
 zma-u.5   100280100   uncharacterized LOC100280100 
 tae-r.2   123098443   4-coumarate--CoA ligase-like 1 
 tae-r.2   123093174   4-coumarate--CoA ligase-like 1 
 tae-r.2   123084909   4-coumarate--CoA ligase-like 1 
 hvu-r.1   123449468   4-coumarate--CoA ligase-like 1 
 sbi-r.1   110430512   4-coumarate--CoA ligase-like 1 
 sbi-r.1   8063037   4-coumarate--CoA ligase-like 1 
 bdi-r.1   100845934   4-coumarate--CoA ligase-like 1 

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Top 50 coexpressed genes to 102609336 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102609336 (cit-r.1 coexpression data)

CoexMap"102609336"


citLOC102609336 | Entrez gene ID : 102609336    
Species cit ath bra ghi bna gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 1 2 3 3 2 1 2 2 1 1 2 1 2 3 1 2 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cit00130 [list] [network] Ubiquinone and other terpenoid-quinone biosynthesis (67 genes)
cit00940 [list] [network] Phenylpropanoid biosynthesis (169 genes)
GO BP
GO CC
GO MF
GO:0016405 [list] [network] CoA-ligase activity  (25 genes)  IEA  
Protein XP_006488029.1 [sequence] [blastp]
XP_024957711.1 [sequence] [blastp]
XP_052288002.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 7,  vacu 1,  mito 1,  E.R. 1  (predict for XP_006488029.1)
plas 4,  E.R. 3,  vacu 2,  nucl_plas 2,  cysk_plas 2,  mito_plas 2,  cyto_plas 2  (predict for XP_024957711.1)
plas 8,  vacu 1  (predict for XP_052288002.1)
Subcellular
localization
TargetP
other 5,  mito 4  (predict for XP_006488029.1)
other 5,  mito 4  (predict for XP_024957711.1)
other 6,  mito 4  (predict for XP_052288002.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
102609336
cit-r.1
for
102610430
cit-r.1
for
102609606
ath-u.5
for
AT4G05160
bra-r.6
for
103839765
bra-r.6
for
103839764
ghi-r.1
for
107927154
ghi-r.1
for
107963914
ghi-r.1
for
107936009
bna-r.1
for
106364455
bna-r.1
for
106349075
bna-r.1
for
106366854
gma-u.5
for
100808944
gma-u.5
for
4CL
vvi-u.5
for
100267198
ppo-u.5
for
18107395
ppo-u.5
for
7494541
mtr-u.5
for
25492399
mtr-u.5
for
25487863
sly-u.5
for
101249706
sot-r.1
for
102597265
nta-r.1
for
107798422
nta-r.1
for
107797035
osa-u.5
for
4331650
zma-u.5
for
100191850
zma-u.5
for
100280100
tae-r.2
for
123098443
tae-r.2
for
123093174
tae-r.2
for
123084909
hvu-r.1
for
123449468
sbi-r.1
for
110430512
sbi-r.1
for
8063037
bdi-r.1
for
100845934


Ortholog ID: 6030
Species cit cit cit ath bra bra ghi ghi ghi bna bna bna gma gma vvi ppo ppo mtr mtr sly sot nta nta osa zma zma tae tae tae hvu sbi sbi bdi
Symbol LOC102609336 LOC102610430 LOC102609606 AT4G05160 LOC103839765 LOC103839764 LOC107963914 LOC107936009 LOC107927147 LOC106364455 LOC106349075 LOC106349076 LOC100808944 4CL LOC100267198 LOC18107395 LOC7494541 LOC25492399 LOC25487863 LOC101249706 LOC102597265 LOC107798422 LOC107797035 LOC4331650 LOC100191850 LOC100280100 LOC123098443 LOC123093174 LOC123084909 LOC123449468 LOC110430512 LOC8063037 LOC100845934
Function* probable CoA ligase CCL7 probable CoA ligase CCL7 probable CoA ligase CCL7 AMP-dependent synthetase and ligase family protein 4-coumarate--CoA ligase-like 7 4-coumarate--CoA ligase-like 7 4-coumarate--CoA ligase-like 7 4-coumarate--CoA ligase-like 7 4-coumarate--CoA ligase-like 7 4-coumarate--CoA ligase-like 7 4-coumarate--CoA ligase-like 7 4-coumarate--CoA ligase-like 7 4-coumarate--CoA ligase-like 7 4-coumarate--CoA ligase-like 7-like probable CoA ligase CCL7 probable CoA ligase CCL7 probable CoA ligase CCL7 4-coumarate--CoA ligase-like 7 4-coumarate--CoA ligase-like 7 probable CoA ligase CCL7 4-coumarate--CoA ligase-like 7 putative CoA ligase CCL7 putative CoA ligase CCL7 4-coumarate--CoA ligase-like 1 4-coumarate--CoA ligase-like 7 uncharacterized LOC100280100 4-coumarate--CoA ligase-like 1 4-coumarate--CoA ligase-like 1 4-coumarate--CoA ligase-like 1 4-coumarate--CoA ligase-like 1 4-coumarate--CoA ligase-like 1 4-coumarate--CoA ligase-like 1 4-coumarate--CoA ligase-like 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 7
cit00710 Carbon fixation by Calvin cycle 6
cit01230 Biosynthesis of amino acids 3
cit00010 Glycolysis / Gluconeogenesis 3
cit00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
cit00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
cit00940 Phenylpropanoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 5
ath00020 Citrate cycle (TCA cycle) 4
ath00480 Glutathione metabolism 4
ath01210 2-Oxocarboxylic acid metabolism 4
ath01230 Biosynthesis of amino acids 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01210 2-Oxocarboxylic acid metabolism 5
ghi01230 Biosynthesis of amino acids 5
ghi00290 Valine, leucine and isoleucine biosynthesis 3
ghi00650 Butanoate metabolism 3
ghi00660 C5-Branched dibasic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01210 2-Oxocarboxylic acid metabolism 5
ghi01230 Biosynthesis of amino acids 5
ghi00290 Valine, leucine and isoleucine biosynthesis 3
ghi00650 Butanoate metabolism 3
ghi00660 C5-Branched dibasic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00130 Ubiquinone and other terpenoid-quinone biosynthesis 4
bna00940 Phenylpropanoid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00130 Ubiquinone and other terpenoid-quinone biosynthesis 4
bna00940 Phenylpropanoid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00130 Ubiquinone and other terpenoid-quinone biosynthesis 4
bna00940 Phenylpropanoid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00500 Starch and sucrose metabolism 2
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00630 Glyoxylate and dicarboxylate metabolism 2
mtr01200 Carbon metabolism 2
mtr04146 Peroxisome 2
mtr00511 Other glycan degradation 2
mtr00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01200 Carbon metabolism 3
mtr00410 beta-Alanine metabolism 2
mtr00630 Glyoxylate and dicarboxylate metabolism 2
mtr00592 alpha-Linolenic acid metabolism 2
mtr04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
sot01210 2-Oxocarboxylic acid metabolism 2
sot01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01240 Biosynthesis of cofactors 3
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta00940 Phenylpropanoid biosynthesis 2
nta03015 mRNA surveillance pathway 2
nta00740 Riboflavin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01240 Biosynthesis of cofactors 3
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta00940 Phenylpropanoid biosynthesis 2
nta03015 mRNA surveillance pathway 2
nta00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01230 Biosynthesis of amino acids 6
osa00270 Cysteine and methionine metabolism 4
osa00670 One carbon pool by folate 4
osa00940 Phenylpropanoid biosynthesis 2
osa00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01240 Biosynthesis of cofactors 3
zma00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00270 Cysteine and methionine metabolism 2
zma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00380 Tryptophan metabolism 3
tae00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
tae00940 Phenylpropanoid biosynthesis 3
tae00052 Galactose metabolism 3
tae00520 Amino sugar and nucleotide sugar metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00380 Tryptophan metabolism 9
tae00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
tae00940 Phenylpropanoid biosynthesis 3
tae00052 Galactose metabolism 3
tae00520 Amino sugar and nucleotide sugar metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00380 Tryptophan metabolism 3
tae00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
tae00940 Phenylpropanoid biosynthesis 3
tae00052 Galactose metabolism 3
tae00520 Amino sugar and nucleotide sugar metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00940 Phenylpropanoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04142 Lysosome 4
sbi04146 Peroxisome 2
sbi00100 Steroid biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102609336 102610430 102609606 825864 103839765 103839764 107963914 107936009 107927147 106364455 106349075 106349076 100808944 100797843 100267198 18107395 7494541 25492399 25487863 101249706 102597265 107798422 107797035 4331650 100191850 100280100 123098443 123093174 123084909 123449468 110430512 8063037 100845934
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