Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100267539   splicing factor-like protein 1 
 vvi-r.5   100267539   splicing factor-like protein 1 
 vvi-m.5   100267539   splicing factor-like protein 1 
 ath-u.5   AT5G51300   splicing factor-like protein 
 gma-u.5   100800982   splicing factor-like protein 1 
 gma-u.5   100818518   splicing factor-like protein 1 
 ppo-u.5   7465495   splicing factor-like protein 1 
 ppo-u.5   18094025   splicing factor-like protein 1 
 mtr-u.5   25491878   splicing factor-like protein 1 
 sly-u.5   101245847   splicing factor-like protein 1 
 sly-u.5   101254207   RNA-binding motif-containing protein 
 sly-u.5   101266106   splicing factor-like protein 1 
 osa-u.5   9268114   splicing factor-like protein 1 
 zma-u.5   103646582   splicing factor-like protein 1 
 zma-u.5   100383202   splicing factor-related 

close


Top 50 coexpressed genes to 100267539 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 100267539 (vvi-u.5 coexpression data)

CoexMap"100267539"


vviLOC100267539 | Entrez gene ID : 100267539      
Species vvi ath gma ppo mtr sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 3 1 2 2 1 3 1 2 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG vvi03040 [list] [network] Spliceosome (236 genes)
GO BP
GO:0048024 [list] [network] regulation of mRNA splicing, via spliceosome  (19 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2597 genes)  IEA  
GO MF
GO:0003729 [list] [network] mRNA binding  (233 genes)  IEA  
GO:0008270 [list] [network] zinc ion binding  (811 genes)  IEA  
Protein XP_002283115.1 [sequence] [blastp]
XP_010644125.1 [sequence] [blastp]
XP_019072711.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_002283115.1)
nucl 10  (predict for XP_010644125.1)
nucl 10  (predict for XP_019072711.1)
Subcellular
localization
TargetP
chlo 5,  other 5  (predict for XP_002283115.1)
chlo 5,  other 5  (predict for XP_010644125.1)
chlo 5,  other 5  (predict for XP_019072711.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100267539
vvi-r.5
for
100267539
vvi-m.5
for
100267539
ath-u.5
for
AT5G51300
gma-u.5
for
100800982
gma-u.5
for
100818518
ppo-u.5
for
7465495
ppo-u.5
for
18094025
mtr-u.5
for
25491878
sly-u.5
for
101245847
sly-u.5
for
101254207
sly-u.5
for
101266106
osa-u.5
for
9268114
zma-u.5
for
103646582
zma-u.5
for
100383202


Ortholog ID: 6102
Species vvi ath gma gma bra ppo ppo mtr ghi ghi bna bna cit sly sly sot sot nta nta osa zma zma tae tae hvu sbi sbi bdi cre cre
Symbol LOC100267539 AT5G51300 LOC100818518 LOC100800982 LOC103857190 LOC7465495 LOC18094025 LOC25491878 LOC107931452 LOC107939826 LOC106345878 LOC106387925 LOC102615366 LOC101254207 LOC101245847 LOC102602752 LOC102591493 LOC107785240 LOC107830863 LOC9268114 LOC103646582 LOC100383202 LOC123189044 LOC123053136 LOC123426531 LOC8057605 LOC8081444 LOC100833136 CHLRE_09g386731v5 CHLRE_12g553750v5
Function* splicing factor-like protein 1 splicing factor-like protein splicing factor-like protein 1 splicing factor-like protein 1 splicing factor-like protein 1 splicing factor-like protein 1 splicing factor-like protein 1 splicing factor-like protein 1 splicing factor-like protein 1 splicing factor-like protein 1 splicing factor-like protein 1 splicing factor-like protein 1 splicing factor-like protein 1 RNA-binding motif-containing protein splicing factor-like protein 1 branchpoint-bridging protein-like branchpoint-bridging protein-like splicing factor-like protein 1 splicing factor-like protein 1 splicing factor-like protein 1 splicing factor-like protein 1 splicing factor-related splicing factor-like protein 1 splicing factor-like protein 1 splicing factor-like protein 1 branchpoint-bridging protein branchpoint-bridging protein splicing factor-like protein 1 uncharacterized protein uncharacterized protein
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 4
ath03013 Nucleocytoplasmic transport 3
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 6
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 2
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 2
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 6
sly03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 6
nta00052 Galactose metabolism 2
nta00511 Other glycan degradation 2
nta00600 Sphingolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03083 Polycomb repressive complex 2
nta03250 Viral life cycle - HIV-1 2
nta03020 RNA polymerase 2
nta03420 Nucleotide excision repair 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 5
sbi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 3
sbi04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04142 Lysosome 4
cre04144 Endocytosis 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100267539 835204 100818518 100800982 103857190 7465495 18094025 25491878 107931452 107939826 106345878 106387925 102615366 101254207 101245847 102602752 102591493 107785240 107830863 9268114 103646582 100383202 123189044 123053136 123426531 8057605 8081444 100833136 5720836 5719707
The preparation time of this page was 0.1 [sec].