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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   100272517   ATP-dependent Clp protease proteolytic subunit 
 zma-r.6   100272517   ATP-dependent Clp protease proteolytic subunit 
 osa-u.5   4349523   ATP-dependent Clp protease proteolytic subunit 4, chloroplastic 
 ath-u.5   CLPP4   CLP protease P4 
 gma-u.5   100814084   ATP-dependent Clp protease proteolytic subunit 4, chloroplastic 
 gma-u.5   100812280   ATP-dependent Clp protease proteolytic subunit 4, chloroplastic 
 sly-u.5   101267919   ATP-dependent Clp protease proteolytic subunit 4, chloroplastic 
 vvi-u.5   100254000   ATP-dependent Clp protease proteolytic subunit 4, chloroplastic 
 ppo-u.5   7491906   ATP-dependent Clp protease proteolytic subunit 4, chloroplastic 
 mtr-u.5   11409952   ATP-dependent Clp protease proteolytic subunit 4, chloroplastic 

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Top 50 coexpressed genes to 100272517 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100272517 (zma-u.5 coexpression data)

CoexMap"100272517"


zmaLOC100272517 | Entrez gene ID : 100272517      
Species zma osa ath gma sly vvi ppo mtr hvu bna cit bra ghi sbi bdi nta tae cre sot
Paralog 2 1 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006515 [list] [network] protein quality control for misfolded or incompletely synthesized proteins  (20 genes)  IEA  
GO CC
GO:0009368 [list] [network] endopeptidase Clp complex  (13 genes)  IEA  
GO MF
GO:0051117 [list] [network] ATPase binding  (20 genes)  IEA  
GO:0004176 [list] [network] ATP-dependent peptidase activity  (36 genes)  IEA  
GO:0004252 [list] [network] serine-type endopeptidase activity  (139 genes)  IEA  
Protein NP_001140458.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for NP_001140458.1)
Subcellular
localization
TargetP
chlo 8,  scret 4  (predict for NP_001140458.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
100272517
zma-r.6
for
100272517
osa-u.5
for
4349523
ath-u.5
for
CLPP4
gma-u.5
for
100814084
gma-u.5
for
100812280
sly-u.5
for
101267919
vvi-u.5
for
100254000
ppo-u.5
for
7491906
mtr-u.5
for
11409952


Ortholog ID: 10361
Species zma sbi osa tae tae hvu bdi ath gma gma sly bra vvi ppo mtr ghi ghi bna bna sot cit nta nta cre
Symbol LOC100272517 LOC8055115 LOC4349523 LOC123126827 LOC123181518 LOC123437162 LOC100824309 CLPP4 LOC100814084 LOC100812280 LOC101267919 LOC103827802 LOC100254000 LOC7491906 LOC11409952 LOC107930114 LOC107900718 LOC106375386 LOC106386411 LOC102605723 LOC102625246 LOC107765360 LOC107785710 CHLRE_12g500950v5
Function* ATP-dependent Clp protease proteolytic subunit ATP-dependent Clp protease proteolytic subunit 4, chloroplastic ATP-dependent Clp protease proteolytic subunit 4, chloroplastic ATP-dependent Clp protease proteolytic subunit 4, chloroplastic ATP-dependent Clp protease proteolytic subunit 4, chloroplastic ATP-dependent Clp protease proteolytic subunit 4, chloroplastic ATP-dependent Clp protease proteolytic subunit 4, chloroplastic CLP protease P4 ATP-dependent Clp protease proteolytic subunit 4, chloroplastic ATP-dependent Clp protease proteolytic subunit 4, chloroplastic ATP-dependent Clp protease proteolytic subunit 4, chloroplastic ATP-dependent Clp protease proteolytic subunit 4, chloroplastic ATP-dependent Clp protease proteolytic subunit 4, chloroplastic ATP-dependent Clp protease proteolytic subunit 4, chloroplastic ATP-dependent Clp protease proteolytic subunit 4, chloroplastic ATP-dependent Clp protease proteolytic subunit 4, chloroplastic ATP-dependent Clp protease proteolytic subunit 4, chloroplastic ATP-dependent Clp protease proteolytic subunit 4, chloroplastic ATP-dependent Clp protease proteolytic subunit 4, chloroplastic ATP-dependent Clp protease proteolytic subunit 4, chloroplastic ATP-dependent Clp protease proteolytic subunit 4, chloroplastic ATP-dependent Clp protease proteolytic subunit 4, chloroplastic ATP-dependent Clp protease proteolytic subunit 4, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 5
zma00300 Lysine biosynthesis 2
zma00470 D-Amino acid metabolism 2
zma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00561 Glycerolipid metabolism 3
tae00564 Glycerophospholipid metabolism 3
tae00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 2
tae00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00230 Purine metabolism 2
ppo00240 Pyrimidine metabolism 2
ppo01232 Nucleotide metabolism 2
ppo00290 Valine, leucine and isoleucine biosynthesis 2
ppo00660 C5-Branched dibasic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 7
mtr01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01240 Biosynthesis of cofactors 4
ghi03010 Ribosome 2
ghi00730 Thiamine metabolism 2
ghi00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01240 Biosynthesis of cofactors 4
ghi03010 Ribosome 2
ghi00730 Thiamine metabolism 2
ghi00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00480 Glutathione metabolism 2
bna00906 Carotenoid biosynthesis 2
bna03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00480 Glutathione metabolism 2
bna00906 Carotenoid biosynthesis 2
bna03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00620 Pyruvate metabolism 4
nta00270 Cysteine and methionine metabolism 2
nta00920 Sulfur metabolism 2
nta04122 Sulfur relay system 2
nta00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00750 Vitamin B6 metabolism 2
nta01240 Biosynthesis of cofactors 2
nta00620 Pyruvate metabolism 2
nta00970 Aminoacyl-tRNA biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100272517 8055115 4349523 123126827 123181518 123437162 100824309 834575 100814084 100812280 101267919 103827802 100254000 7491906 11409952 107930114 107900718 106375386 106386411 102605723 102625246 107765360 107785710 5716386
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