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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   100273480   30S ribosomal protein S16-like 
 zma-r.6   100273480   30S ribosomal protein S16-like 
 zma-m.5   100273480   30S ribosomal protein S16-like 
 sbi-r.1   8054757   30S ribosomal protein S16-2, chloroplastic/mitochondrial 
 osa-u.5   4346044   small ribosomal subunit protein bS16m/bS16c 
 osa-u.5   4347467   small ribosomal subunit protein bS16m/bS16c 
 tae-r.2   123180297   30S ribosomal protein S16-2, chloroplastic/mitochondrial 
 tae-r.2   123174551   30S ribosomal protein S16-2, chloroplastic/mitochondrial-like 
 tae-r.2   123122005   30S ribosomal protein S16-2, chloroplastic/mitochondrial 
 hvu-r.1   123399593   30S ribosomal protein S16-2, chloroplastic/mitochondrial 
 bdi-r.1   100834253   30S ribosomal protein S16-2, chloroplastic/mitochondrial 
 ath-u.5   SSR16   small subunit ribosomal protein 16 
 ath-u.5   AT5G56940   Ribosomal protein S16 family protein 
 gma-u.5   100499851   uncharacterized LOC100499851 
 gma-u.5   100305630   uncharacterized LOC100305630 
 gma-u.5   100788481   30S ribosomal protein S16-like 
 sly-u.5   rps16   30S ribosomal protein S16 
 bra-r.6   103845127   30S ribosomal protein S16-2, chloroplastic/mitochondrial 
 bra-r.6   103836333   30S ribosomal protein S16-1, chloroplastic 
 bra-r.6   103851798   30S ribosomal protein S16-2, chloroplastic/mitochondrial 
 vvi-u.5   100245562   small ribosomal subunit protein bS16m/bS16c 
 ppo-u.5   18104602   30S ribosomal protein S16-1, chloroplastic 
 ppo-u.5   18098259   30S ribosomal protein S16-2, chloroplastic/mitochondrial 
 mtr-u.5   11438462   30S ribosomal protein S16-2, chloroplastic/mitochondrial 
 mtr-u.5   11443660   30S ribosomal protein S16-2, chloroplastic/mitochondrial 
 mtr-u.5   25484461   30S ribosomal protein S16-1, chloroplastic 
 ghi-r.1   107897357   30S ribosomal protein S16-2, chloroplastic/mitochondrial 
 ghi-r.1   107937728   30S ribosomal protein S16-2, chloroplastic/mitochondrial 
 ghi-r.1   107907135   30S ribosomal protein S16-2, chloroplastic/mitochondrial 
 bna-r.1   111212698   30S ribosomal protein S16-1, chloroplastic 
 bna-r.1   111212001   30S ribosomal protein S16-2, chloroplastic/mitochondrial-like 
 bna-r.1   106389408   30S ribosomal protein S16-2, chloroplastic/mitochondrial 
 sot-r.1   102579828   30S ribosomal protein S16 
 nta-r.1   107821861   small ribosomal subunit protein bS16m/bS16c-like 
 nta-r.1   107818744   small ribosomal subunit protein bS16m/bS16c-like 
 nta-r.1   107813056   small ribosomal subunit protein bS16m/bS16c-like 
 cre-r.1   CHLRE_10g429550v5   uncharacterized protein 

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Top 50 coexpressed genes to 100273480 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100273480 (zma-u.5 coexpression data)

CoexMap"100273480"


zmaLOC100273480 | Entrez gene ID : 100273480      
Species zma sbi osa tae hvu bdi ath gma sly bra vvi ppo mtr ghi bna sot nta cre cit
Paralog 3 1 2 3 1 1 2 3 1 3 1 2 3 3 3 1 3 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG zma03010 [list] [network] Ribosome (2925 genes)
GO BP
GO:0032543 [list] [network] mitochondrial translation  (35 genes)  IEA  
GO CC
GO:0015935 [list] [network] small ribosomal subunit  (128 genes)  IEA  
GO:0005840 [list] [network] ribosome  (477 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (479 genes)  IEA  
Protein NP_001141389.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  nucl 2,  mito 1,  cyto_nucl 1  (predict for NP_001141389.1)
Subcellular
localization
TargetP
mito 8  (predict for NP_001141389.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
100273480
zma-r.6
for
100273480
zma-m.5
for
100273480
sbi-r.1
for
8054757
osa-u.5
for
4346044
osa-u.5
for
4347467
tae-r.2
for
123180297
tae-r.2
for
123174551
tae-r.2
for
123122005
hvu-r.1
for
123399593
bdi-r.1
for
100834253
ath-u.5
for
SSR16
ath-u.5
for
AT5G56940
gma-u.5
for
100499851
gma-u.5
for
100305630
gma-u.5
for
100788481
sly-u.5
for
rps16
bra-r.6
for
103845127
bra-r.6
for
103836333
bra-r.6
for
103851798
vvi-u.5
for
100245562
ppo-u.5
for
18104602
ppo-u.5
for
18098259
mtr-u.5
for
11438462
mtr-u.5
for
11443660
mtr-u.5
for
25484461
ghi-r.1
for
107897357
ghi-r.1
for
107937728
ghi-r.1
for
107907135
bna-r.1
for
111212698
bna-r.1
for
111212001
bna-r.1
for
106389408
sot-r.1
for
102579828
nta-r.1
for
107821861
nta-r.1
for
107818744
nta-r.1
for
107813056
cre-r.1
for
CHLRE_10g429550v5


Ortholog ID: 4427
Species zma sbi osa osa tae tae tae hvu bdi ath ath gma gma gma sly bra bra bra vvi ppo ppo mtr mtr mtr ghi ghi ghi bna bna bna sot nta nta nta cre
Symbol LOC100273480 LOC8054757 LOC4346044 LOC4347467 LOC123180297 LOC123122005 LOC123112498 LOC123399593 LOC100834253 SSR16 AT5G56940 LOC100499851 LOC100788481 LOC100527012 rps16 LOC103845127 LOC103836333 LOC103851798 LOC100245562 LOC18104602 LOC18098259 LOC11438462 LOC11443660 LOC25484461 LOC107897357 LOC107907135 LOC107913886 LOC111212698 LOC106389408 LOC106370329 LOC102579828 LOC107821861 LOC107813056 LOC107831371 CHLRE_10g429550v5
Function* 30S ribosomal protein S16-like 30S ribosomal protein S16-2, chloroplastic/mitochondrial small ribosomal subunit protein bS16m/bS16c small ribosomal subunit protein bS16m/bS16c 30S ribosomal protein S16-2, chloroplastic/mitochondrial 30S ribosomal protein S16-2, chloroplastic/mitochondrial 30S ribosomal protein S16-2, chloroplastic/mitochondrial 30S ribosomal protein S16-2, chloroplastic/mitochondrial 30S ribosomal protein S16-2, chloroplastic/mitochondrial small subunit ribosomal protein 16 Ribosomal protein S16 family protein uncharacterized LOC100499851 30S ribosomal protein S16-like 30S ribosomal protein S16 30S ribosomal protein S16 30S ribosomal protein S16-2, chloroplastic/mitochondrial 30S ribosomal protein S16-1, chloroplastic 30S ribosomal protein S16-2, chloroplastic/mitochondrial small ribosomal subunit protein bS16m/bS16c 30S ribosomal protein S16-1, chloroplastic 30S ribosomal protein S16-2, chloroplastic/mitochondrial 30S ribosomal protein S16-2, chloroplastic/mitochondrial 30S ribosomal protein S16-2, chloroplastic/mitochondrial 30S ribosomal protein S16-1, chloroplastic 30S ribosomal protein S16-2, chloroplastic/mitochondrial 30S ribosomal protein S16-2, chloroplastic/mitochondrial 30S ribosomal protein S16-2, chloroplastic/mitochondrial 30S ribosomal protein S16-1, chloroplastic 30S ribosomal protein S16-2, chloroplastic/mitochondrial 30S ribosomal protein S16-2, chloroplastic/mitochondrial 30S ribosomal protein S16 small ribosomal subunit protein bS16m/bS16c-like small ribosomal subunit protein bS16m/bS16c-like small ribosomal subunit protein bS16m/bS16c uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 5
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 7
sbi00190 Oxidative phosphorylation 2
sbi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 6
osa03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 7
osa03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00760 Nicotinate and nicotinamide metabolism 3
tae01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 9
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
hvu03008 Ribosome biogenesis in eukaryotes 2
hvu03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01240 Biosynthesis of cofactors 4
gma03010 Ribosome 3
gma00230 Purine metabolism 2
gma00240 Pyrimidine metabolism 2
gma01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00190 Oxidative phosphorylation 5
sly03010 Ribosome 5
sly03040 Spliceosome 3
sly03013 Nucleocytoplasmic transport 2
sly03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03050 Proteasome 6
sot00190 Oxidative phosphorylation 3
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 4
nta04146 Peroxisome 2
nta00061 Fatty acid biosynthesis 2
nta00062 Fatty acid elongation 2
nta01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 4
nta04146 Peroxisome 2
nta03018 RNA degradation 2
nta00061 Fatty acid biosynthesis 2
nta00062 Fatty acid elongation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100273480 8054757 4346044 4347467 123180297 123122005 123112498 123399593 100834253 829614 835796 100499851 100788481 100527012 100191136 103845127 103836333 103851798 100245562 18104602 18098259 11438462 11443660 25484461 107897357 107907135 107913886 111212698 106389408 106370329 102579828 107821861 107813056 107831371 66054989
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