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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   18098259   30S ribosomal protein S16-2, chloroplastic/mitochondrial 
 ppo-r.4   18098259   30S ribosomal protein S16-2, chloroplastic/mitochondrial 
 ppo-u.5   18104602   30S ribosomal protein S16-1, chloroplastic 
 gma-u.5   100305630   uncharacterized LOC100305630 
 gma-u.5   100499851   uncharacterized LOC100499851 
 gma-u.5   100527012   30S ribosomal protein S16 
 mtr-u.5   11443660   30S ribosomal protein S16-2, chloroplastic/mitochondrial 
 mtr-u.5   25484461   30S ribosomal protein S16-1, chloroplastic 
 mtr-u.5   11438462   30S ribosomal protein S16-2, chloroplastic/mitochondrial 
 ath-u.5   SSR16   small subunit ribosomal protein 16 
 ath-u.5   AT5G56940   Ribosomal protein S16 family protein 
 vvi-u.5   100245562   small ribosomal subunit protein bS16m/bS16c 
 sly-u.5   rps16   30S ribosomal protein S16 
 osa-u.5   4346044   small ribosomal subunit protein bS16m/bS16c 
 osa-u.5   4347467   small ribosomal subunit protein bS16m/bS16c 
 zma-u.5   100273480   30S ribosomal protein S16-like 

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Top 50 coexpressed genes to 18098259 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 18098259 (ppo-u.5 coexpression data)

CoexMap"18098259"


ppoLOC18098259 | Entrez gene ID : 18098259    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 3 3 2 1 1 2 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop03010 [list] [network] Ribosome (698 genes)
GO BP
GO:0032543 [list] [network] mitochondrial translation  (23 genes)  IEA  
GO CC
GO:0015935 [list] [network] small ribosomal subunit  (138 genes)  IEA  
GO:0005840 [list] [network] ribosome  (453 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (439 genes)  IEA  
Protein XP_006384971.2 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  chlo 1,  nucl 1  (predict for XP_006384971.2)
Subcellular
localization
TargetP
mito 7  (predict for XP_006384971.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
18098259

.
ppo-r.4
for
18098259

.
ppo-u.5
for
18104602

.
gma-u.5
for
100305630

.
gma-u.5
for
100499851

.
gma-u.5
for
100527012

.
mtr-u.5
for
11443660

.
mtr-u.5
for
25484461

.
mtr-u.5
for
11438462

.
ath-u.5
for
SSR16

.
ath-u.5
for
AT5G56940

.
vvi-u.5
for
100245562

.
sly-u.5
for
rps16

.
osa-u.5
for
4346044

.
osa-u.5
for
4347467

.
zma-u.5
for
100273480

.


Ortholog ID: 4427
Species ath ath gma gma sly osa osa zma bra bra vvi ppo ppo mtr mtr tae tae hvu ghi ghi bna bna cre sbi sot bdi nta nta
Symbol SSR16 AT5G56940 LOC100788481 LOC100499851 rps16 LOC4347467 LOC4346044 LOC100273480 LOC103845127 LOC103851798 LOC100245562 LOC18104602 LOC18098259 LOC11438462 LOC25484461 LOC123180297 LOC123112498 LOC123399593 LOC107897357 LOC107907135 LOC106370329 LOC111212698 CHLRE_10g429550v5 LOC8054757 LOC102579828 LOC100834253 LOC107821861 LOC107831371
Function* small subunit ribosomal protein 16 Ribosomal protein S16 family protein 30S ribosomal protein S16-like uncharacterized LOC100499851 30S ribosomal protein S16 small ribosomal subunit protein bS16m/bS16c small ribosomal subunit protein bS16m/bS16c 30S ribosomal protein S16-like 30S ribosomal protein S16-2, chloroplastic/mitochondrial 30S ribosomal protein S16-2, chloroplastic/mitochondrial small ribosomal subunit protein bS16m/bS16c 30S ribosomal protein S16-1, chloroplastic 30S ribosomal protein S16-2, chloroplastic/mitochondrial 30S ribosomal protein S16-2, chloroplastic/mitochondrial 30S ribosomal protein S16-1, chloroplastic 30S ribosomal protein S16-2, chloroplastic/mitochondrial 30S ribosomal protein S16-2, chloroplastic/mitochondrial 30S ribosomal protein S16-2, chloroplastic/mitochondrial 30S ribosomal protein S16-2, chloroplastic/mitochondrial 30S ribosomal protein S16-2, chloroplastic/mitochondrial 30S ribosomal protein S16-2, chloroplastic/mitochondrial 30S ribosomal protein S16-1, chloroplastic uncharacterized protein 30S ribosomal protein S16-2, chloroplastic/mitochondrial 30S ribosomal protein S16 30S ribosomal protein S16-2, chloroplastic/mitochondrial small ribosomal subunit protein bS16m/bS16c-like small ribosomal subunit protein bS16m/bS16c
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00190 Oxidative phosphorylation 5
sly03010 Ribosome 5
sly03040 Spliceosome 3
sly03013 Nucleocytoplasmic transport 2
sly03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 7
osa03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 6
osa03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 5
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00760 Nicotinate and nicotinamide metabolism 3
tae01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 9
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
hvu03008 Ribosome biogenesis in eukaryotes 2
hvu03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 7
sbi00190 Oxidative phosphorylation 2
sbi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03050 Proteasome 6
sot00190 Oxidative phosphorylation 3
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 4
nta04146 Peroxisome 2
nta03018 RNA degradation 2
nta00061 Fatty acid biosynthesis 2
nta00062 Fatty acid elongation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 829614 835796 100788481 100499851 100191136 4347467 4346044 100273480 103845127 103851798 100245562 18104602 18098259 11438462 25484461 123180297 123112498 123399593 107897357 107907135 106370329 111212698 66054989 8054757 102579828 100834253 107821861 107831371
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