ATTED-II : GeneCoexpression result

Species	Gene	Description
zma-u.5	100273768	uncharacterized LOC100273768
zma-r.6	100273768	uncharacterized LOC100273768
zma-m.5	100273768	uncharacterized LOC100273768
osa-u.5	4343524	uncharacterized LOC4343524
ath-u.5	AT1G11480	eukaryotic translation initiation factor-like protein
gma-u.5	100804599	uncharacterized LOC100804599
gma-u.5	100804052	uncharacterized LOC100804052
sly-u.5	101266783	uncharacterized LOC101266783
vvi-u.5	100258551	uncharacterized LOC100258551
vvi-u.5	100241484	uncharacterized LOC100241484
ppo-u.5	18107018	uncharacterized LOC18107018
ppo-u.5	7495293	uncharacterized LOC7495293
ppo-u.5	7486055	uncharacterized LOC7486055
mtr-u.5	25493249	uncharacterized LOC25493249

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0003743 [list] [network] translation initiation factor activity	(86 genes)	IEA
GO:0003729 [list] [network] mRNA binding	(346 genes)	IEA

Protein

NP_001338566.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 4, cyto 4, cyto_nucl 4

(predict for NP_001338566.1)

Subcellular
localization
TargetP

chlo 5, other 4

(predict for NP_001338566.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	zma-u.5 for 100273768	zma-r.6 for 100273768	zma-m.5 for 100273768	osa-u.5 for 4343524	ath-u.5 for AT1G11480	gma-u.5 for 100804599	gma-u.5 for 100804052	sly-u.5 for 101266783	vvi-u.5 for 100258551	vvi-u.5 for 100241484	ppo-u.5 for 18107018	ppo-u.5 for 7495293	ppo-u.5 for 7486055	mtr-u.5 for 25493249

Ortholog ID: 8228

Species

zma

sbi

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

Function^*

uncharacterized LOC100273768

protein IQ-DOMAIN 14

uncharacterized LOC4343524

SH3 domain-containing protein C23A1.17

translation initiation factor IF-2

transcription initiation factor TFIID subunit 4

eukaryotic translation initiation factor-like protein

uncharacterized LOC100804052

uncharacterized LOC100804599

uncharacterized LOC101266783

uncharacterized LOC103871906

uncharacterized LOC100241484

uncharacterized LOC100258551

uncharacterized LOC7486055

uncharacterized LOC7495293

uncharacterized LOC25493249

uncharacterized LOC107891799

uncharacterized LOC107888987

uncharacterized LOC106401565

uncharacterized LOC106389436

uncharacterized LOC102600022

uncharacterized LOC102618187

uncharacterized LOC107781268

uncharacterized LOC107820005

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00020	Citrate cycle (TCA cycle)	4
zma01200	Carbon metabolism	4
zma00190	Oxidative phosphorylation	3
zma03015	mRNA surveillance pathway	2
zma04382	Cornified envelope formation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00020	Citrate cycle (TCA cycle)	4
sbi00785	Lipoic acid metabolism	4
sbi01200	Carbon metabolism	4
sbi01210	2-Oxocarboxylic acid metabolism	4
sbi00670	One carbon pool by folate	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03040	Spliceosome	2
osa00190	Oxidative phosphorylation	2
osa03050	Proteasome	2
osa03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03050	Proteasome	2
bdi04820	Cytoskeleton in muscle cells	2
bdi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	3
ath03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03015	mRNA surveillance pathway	5
gma03250	Viral life cycle - HIV-1	4
gma03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04141	Protein processing in endoplasmic reticulum	2
gma03015	mRNA surveillance pathway	2
gma03250	Viral life cycle - HIV-1	2
gma03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04120	Ubiquitin mediated proteolysis	3
ppo03050	Proteasome	3
ppo01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03040	Spliceosome	6
ghi04016	MAPK signaling pathway - plant	2
ghi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03040	Spliceosome	6
ghi04016	MAPK signaling pathway - plant	2
ghi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04144	Endocytosis	2

Expression

Expression pattern

Entrez Gene ID^*

100273768

8081720

4343524

123188363

123052478

123425784

100828465

837691

100804052

100804599

101266783

103871906

100241484

100258551

7486055

7495293

25493249

107891799

107888987

106401565

106389436

102600022

102618187

107781268

107820005

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100273768 (zma-u.5 coexpression data)

Top 50 enrichment test to 100273768 (zma-u.5 coexpression data)


Species	zma	osa	ath	gma	sly	vvi	ppo	mtr	hvu	bna	cit	bra	ghi	sbi	bdi	nta	tae	cre	sot
Paralog	3	1	1	2	1	2	3	1	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100273768 (zma-u.5 coexpression data)

Top 50 enrichment test to 100273768 (zma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**