ATTED-II : GeneCoexpression result

Species	Gene	Description
gma-u.5	100804599	uncharacterized LOC100804599
gma-r.7	100804599	uncharacterized LOC100804599
gma-u.5	100804052	uncharacterized LOC100804052
mtr-u.5	25493249	uncharacterized LOC25493249
ppo-u.5	18107018	uncharacterized LOC18107018
ppo-u.5	7495293	uncharacterized LOC7495293
ppo-u.5	7486055	uncharacterized LOC7486055
ath-u.5	AT1G11480	eukaryotic translation initiation factor-like protein
bra-r.6	103871906	uncharacterized LOC103871906
vvi-u.5	100258551	uncharacterized LOC100258551
vvi-u.5	100241484	uncharacterized LOC100241484
ghi-r.1	107941110	uncharacterized LOC107941110
ghi-r.1	107925149	uncharacterized LOC107925149
ghi-r.1	107891799	uncharacterized LOC107891799
bna-r.1	106401565	uncharacterized LOC106401565
bna-r.1	106389436	uncharacterized LOC106389436
cit-r.1	102618187	uncharacterized LOC102618187
sly-u.5	101266783	uncharacterized LOC101266783
sot-r.1	102600022	uncharacterized LOC102600022
nta-r.1	107820005	uncharacterized LOC107820005
nta-r.1	107781268	uncharacterized LOC107781268
osa-u.5	4343524	uncharacterized LOC4343524
zma-u.5	100273768	uncharacterized LOC100273768
tae-r.2	123188363	SH3 domain-containing protein C23A1.17
tae-r.2	123052478	translation initiation factor IF-2
tae-r.2	123044603	translation initiation factor IF-2
hvu-r.1	123425784	translation initiation factor IF-2
sbi-r.1	8081720	protein IQ-DOMAIN 14
bdi-r.1	100828465	transcription initiation factor TFIID subunit 4

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0003743 [list] [network] translation initiation factor activity	(107 genes)	IEA
GO:0003729 [list] [network] mRNA binding	(563 genes)	IEA

Protein

XP_003530997.2 [sequence] [blastp]

Subcellular
localization
wolf

nucl 9

(predict for XP_003530997.2)

Subcellular
localization
TargetP

other 6

(predict for XP_003530997.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	gma-u.5 for 100804599	gma-r.7 for 100804599	gma-u.5 for 100804052	mtr-u.5 for 25493249	ppo-u.5 for 18107018	ppo-u.5 for 7495293	ppo-u.5 for 7486055	ath-u.5 for AT1G11480	bra-r.6 for 103871906	vvi-u.5 for 100258551	vvi-u.5 for 100241484	ghi-r.1 for 107941110	ghi-r.1 for 107925149	ghi-r.1 for 107891799	bna-r.1 for 106401565	bna-r.1 for 106389436	cit-r.1 for 102618187	sly-u.5 for 101266783	sot-r.1 for 102600022	nta-r.1 for 107820005	nta-r.1 for 107781268	osa-u.5 for 4343524	zma-u.5 for 100273768	tae-r.2 for 123188363	tae-r.2 for 123052478	tae-r.2 for 123044603	hvu-r.1 for 123425784	sbi-r.1 for 8081720	bdi-r.1 for 100828465

Ortholog

Ortholog ID: 8228

Species

gma

mtr

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized LOC100804599

uncharacterized LOC100804052

uncharacterized LOC25493249

uncharacterized LOC18107018

uncharacterized LOC7495293

uncharacterized LOC7486055

eukaryotic translation initiation factor-like protein

uncharacterized LOC103871906

uncharacterized LOC100258551

uncharacterized LOC100241484

uncharacterized LOC107925149

uncharacterized LOC107891799

uncharacterized LOC107888987

uncharacterized LOC106401565

uncharacterized LOC106389436

uncharacterized LOC102618187

uncharacterized LOC101266783

uncharacterized LOC102600022

uncharacterized LOC107820005

uncharacterized LOC107781268

uncharacterized LOC4343524

uncharacterized LOC100273768

SH3 domain-containing protein C23A1.17

translation initiation factor IF-2

protein IQ-DOMAIN 14

transcription initiation factor TFIID subunit 4

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04141	Protein processing in endoplasmic reticulum	2
gma03015	mRNA surveillance pathway	2
gma03250	Viral life cycle - HIV-1	2
gma03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03015	mRNA surveillance pathway	5
gma03250	Viral life cycle - HIV-1	4
gma03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04120	Ubiquitin mediated proteolysis	3
ppo03050	Proteasome	3
ppo01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	3
ath03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03040	Spliceosome	6
ghi04016	MAPK signaling pathway - plant	2
ghi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03040	Spliceosome	6
ghi04016	MAPK signaling pathway - plant	2
ghi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03040	Spliceosome	2
osa00190	Oxidative phosphorylation	2
osa03050	Proteasome	2
osa03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00020	Citrate cycle (TCA cycle)	4
zma01200	Carbon metabolism	4
zma00190	Oxidative phosphorylation	3
zma03015	mRNA surveillance pathway	2
zma04382	Cornified envelope formation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03022	Basal transcription factors	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00020	Citrate cycle (TCA cycle)	4
sbi00785	Lipoic acid metabolism	4
sbi01200	Carbon metabolism	4
sbi01210	2-Oxocarboxylic acid metabolism	4
sbi00670	One carbon pool by folate	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03050	Proteasome	2
bdi04820	Cytoskeleton in muscle cells	2
bdi04141	Protein processing in endoplasmic reticulum	2

Expression

Expression pattern

Entrez Gene ID^*

100804599

100804052

25493249

18107018

7495293

7486055

837691

103871906

100258551

100241484

107925149

107891799

107888987

106401565

106389436

102618187

101266783

102600022

107820005

107781268

4343524

100273768

123188363

123052478

123044603

123425784

8081720

100828465

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100804599 (gma-u.5 coexpression data)

Top 50 enrichment test to 100804599 (gma-u.5 coexpression data)


Species	gma	mtr	ppo	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	3	1	3	1	1	2	3	2	1	1	1	2	1	1	3	1	1	1	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100804599 (gma-u.5 coexpression data)

Top 50 enrichment test to 100804599 (gma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**