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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   100275356   uncharacterized LOC100275356 
 zma-r.6   100275356   uncharacterized LOC100275356 
 osa-u.5   4331835   protein WHAT'S THIS FACTOR 1, chloroplastic 
 osa-u.5   4350682   protein WHAT'S THIS FACTOR 1, chloroplastic 
 tae-r.2   123098671   protein WHAT'S THIS FACTOR 1 homolog, chloroplastic-like 
 tae-r.2   123093396   protein WHAT'S THIS FACTOR 1, chloroplastic 
 tae-r.2   123084706   protein WHAT'S THIS FACTOR 1 homolog, chloroplastic 
 hvu-r.1   123449619   protein WHAT'S THIS FACTOR 1 homolog, chloroplastic 
 bdi-r.1   100834444   protein WHAT'S THIS FACTOR 1 homolog 
 ath-u.5   AT5G21970   Ubiquitin carboxyl-terminal hydrolase family protein 
 gma-u.5   100817082   protein WHAT'S THIS FACTOR 1 homolog, chloroplastic 
 sly-u.5   101267556   protein WHAT'S THIS FACTOR 1 homolog, chloroplastic 
 bra-r.6   103845583   protein WHAT'S THIS FACTOR 1 homolog, chloroplastic 
 vvi-u.5   100855202   protein WHAT'S THIS FACTOR 1 homolog, chloroplastic 
 mtr-u.5   25490017   protein WHAT'S THIS FACTOR 1 homolog, chloroplastic 
 ghi-r.1   107901014   protein WHAT'S THIS FACTOR 1 homolog, chloroplastic 
 ghi-r.1   107961623   protein WHAT'S THIS FACTOR 1 homolog, chloroplastic 
 bna-r.1   106371673   protein WHAT'S THIS FACTOR 1 homolog, chloroplastic 
 bna-r.1   106421231   protein WHAT'S THIS FACTOR 1 homolog, chloroplastic 
 sot-r.1   102599599   protein ROOT PRIMORDIUM DEFECTIVE 1 
 cit-r.1   102627144   protein WHAT'S THIS FACTOR 1 homolog, chloroplastic 
 nta-r.1   107785500   protein WHAT'S THIS FACTOR 1 homolog, chloroplastic 
 nta-r.1   107815324   protein WHAT'S THIS FACTOR 1 homolog, chloroplastic 
 nta-r.1   107777025   protein WHAT'S THIS FACTOR 1 homolog, chloroplastic-like 

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Top 50 coexpressed genes to 100275356 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100275356 (zma-u.5 coexpression data)

CoexMap"100275356"


zmaLOC100275356 | Entrez gene ID : 100275356      
Species zma osa tae hvu bdi ath gma sly bra vvi mtr ghi bna sot cit nta ppo cre sbi
Paralog 2 2 3 1 1 1 1 1 1 1 1 2 2 1 1 3 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1549 genes)  IEA  
Protein NP_001142923.1 [sequence] [blastp]
XP_008669449.1 [sequence] [blastp]
XP_035821275.1 [sequence] [blastp]
XP_035821279.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 2,  cyto_mito 1,  nucl 1  (predict for NP_001142923.1)
chlo 6,  mito 2,  cyto_mito 1  (predict for XP_008669449.1)
chlo 6,  mito 2,  cyto_mito 1  (predict for XP_035821275.1)
chlo 6,  mito 2,  cyto_mito 1  (predict for XP_035821279.1)
Subcellular
localization
TargetP
mito 7  (predict for NP_001142923.1)
mito 5,  chlo 3  (predict for XP_008669449.1)
mito 5,  chlo 3  (predict for XP_035821275.1)
mito 5,  chlo 3  (predict for XP_035821279.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
100275356
zma-r.6
for
100275356
osa-u.5
for
4331835
osa-u.5
for
4350682
tae-r.2
for
123098671
tae-r.2
for
123093396
tae-r.2
for
123084706
hvu-r.1
for
123449619
bdi-r.1
for
100834444
ath-u.5
for
AT5G21970
gma-u.5
for
100817082
sly-u.5
for
101267556
bra-r.6
for
103845583
vvi-u.5
for
100855202
mtr-u.5
for
25490017
ghi-r.1
for
107901014
ghi-r.1
for
107961623
bna-r.1
for
106371673
bna-r.1
for
106421231
sot-r.1
for
102599599
cit-r.1
for
102627144
nta-r.1
for
107785500
nta-r.1
for
107815324
nta-r.1
for
107777025


Ortholog ID: 10317
Species zma osa osa tae tae tae hvu bdi ath gma sly bra vvi mtr ghi ghi bna bna sot cit nta nta nta
Symbol LOC100275356 LOC4331835 LOC4350682 LOC123098671 LOC123093396 LOC123084706 LOC123449619 LOC100834444 AT5G21970 LOC100817082 LOC101267556 LOC103845583 LOC100855202 LOC25490017 LOC107901014 LOC107961623 LOC106371673 LOC106421231 LOC102599599 LOC102627144 LOC107785500 LOC107815324 LOC107777025
Function* uncharacterized LOC100275356 protein WHAT'S THIS FACTOR 1, chloroplastic protein WHAT'S THIS FACTOR 1, chloroplastic protein WHAT'S THIS FACTOR 1 homolog, chloroplastic-like protein WHAT'S THIS FACTOR 1, chloroplastic protein WHAT'S THIS FACTOR 1 homolog, chloroplastic protein WHAT'S THIS FACTOR 1 homolog, chloroplastic protein WHAT'S THIS FACTOR 1 homolog Ubiquitin carboxyl-terminal hydrolase family protein protein WHAT'S THIS FACTOR 1 homolog, chloroplastic protein WHAT'S THIS FACTOR 1 homolog, chloroplastic protein WHAT'S THIS FACTOR 1 homolog, chloroplastic protein WHAT'S THIS FACTOR 1 homolog, chloroplastic protein WHAT'S THIS FACTOR 1 homolog, chloroplastic protein WHAT'S THIS FACTOR 1 homolog, chloroplastic protein WHAT'S THIS FACTOR 1 homolog, chloroplastic protein WHAT'S THIS FACTOR 1 homolog, chloroplastic protein WHAT'S THIS FACTOR 1 homolog, chloroplastic protein ROOT PRIMORDIUM DEFECTIVE 1 protein WHAT'S THIS FACTOR 1 homolog, chloroplastic protein WHAT'S THIS FACTOR 1 homolog, chloroplastic protein WHAT'S THIS FACTOR 1 homolog, chloroplastic protein WHAT'S THIS FACTOR 1 homolog, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
gma00730 Thiamine metabolism 2
gma01240 Biosynthesis of cofactors 2
gma04122 Sulfur relay system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 2
mtr03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
sot03013 Nucleocytoplasmic transport 2
sot03018 RNA degradation 2
sot03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03420 Nucleotide excision repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100275356 4331835 4350682 123098671 123093396 123084706 123449619 100834444 832257 100817082 101267556 103845583 100855202 25490017 107901014 107961623 106371673 106421231 102599599 102627144 107785500 107815324 107777025
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