Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   25490017   protein WHAT'S THIS FACTOR 1 homolog, chloroplastic 
 mtr-r.5   25490017   protein WHAT'S THIS FACTOR 1 homolog, chloroplastic 
 gma-u.5   100817082   protein WHAT'S THIS FACTOR 1 homolog, chloroplastic 
 ath-u.5   AT5G21970   Ubiquitin carboxyl-terminal hydrolase family protein 
 bra-r.6   103845583   protein WHAT'S THIS FACTOR 1 homolog, chloroplastic 
 vvi-u.5   100855202   protein WHAT'S THIS FACTOR 1 homolog, chloroplastic 
 ghi-r.1   107901014   protein WHAT'S THIS FACTOR 1 homolog, chloroplastic 
 ghi-r.1   107961623   protein WHAT'S THIS FACTOR 1 homolog, chloroplastic 
 bna-r.1   106421231   protein WHAT'S THIS FACTOR 1 homolog, chloroplastic 
 bna-r.1   106371673   protein WHAT'S THIS FACTOR 1 homolog, chloroplastic 
 cit-r.1   102627144   protein WHAT'S THIS FACTOR 1 homolog, chloroplastic 
 sly-u.5   101267556   protein WHAT'S THIS FACTOR 1 homolog, chloroplastic 
 sot-r.1   102599599   protein ROOT PRIMORDIUM DEFECTIVE 1 
 nta-r.1   107815324   protein WHAT'S THIS FACTOR 1 homolog, chloroplastic 
 nta-r.1   107785500   protein WHAT'S THIS FACTOR 1 homolog, chloroplastic 
 nta-r.1   107777025   protein WHAT'S THIS FACTOR 1 homolog, chloroplastic-like 
 osa-u.5   4331835   protein WHAT'S THIS FACTOR 1, chloroplastic 
 osa-u.5   4350682   protein WHAT'S THIS FACTOR 1, chloroplastic 
 zma-u.5   100275356   uncharacterized LOC100275356 
 tae-r.2   123084706   protein WHAT'S THIS FACTOR 1 homolog, chloroplastic 
 tae-r.2   123093396   protein WHAT'S THIS FACTOR 1, chloroplastic 
 tae-r.2   123098671   protein WHAT'S THIS FACTOR 1 homolog, chloroplastic-like 
 hvu-r.1   123449619   protein WHAT'S THIS FACTOR 1 homolog, chloroplastic 
 bdi-r.1   100834444   protein WHAT'S THIS FACTOR 1 homolog 

close


Top 50 coexpressed genes to 25490017 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 25490017 (mtr-u.5 coexpression data)

CoexMap"25490017"


mtrLOC25490017 | Entrez gene ID : 25490017      
Species mtr gma ath bra vvi ghi bna cit sly sot nta osa zma tae hvu bdi ppo cre sbi
Paralog 2 1 1 1 1 2 2 1 1 1 3 2 1 3 1 1 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1400 genes)  IEA  
Protein XP_024634915.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  cyto 3,  chlo_mito 3  (predict for XP_024634915.1)
Subcellular
localization
TargetP
mito 7  (predict for XP_024634915.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
25490017
mtr-r.5
for
25490017
gma-u.5
for
100817082
ath-u.5
for
AT5G21970
bra-r.6
for
103845583
vvi-u.5
for
100855202
ghi-r.1
for
107901014
ghi-r.1
for
107961623
bna-r.1
for
106421231
bna-r.1
for
106371673
cit-r.1
for
102627144
sly-u.5
for
101267556
sot-r.1
for
102599599
nta-r.1
for
107815324
nta-r.1
for
107785500
nta-r.1
for
107777025
osa-u.5
for
4331835
osa-u.5
for
4350682
zma-u.5
for
100275356
tae-r.2
for
123084706
tae-r.2
for
123093396
tae-r.2
for
123098671
hvu-r.1
for
123449619
bdi-r.1
for
100834444


Ortholog ID: 10317
Species mtr gma ath bra vvi ghi ghi bna bna cit sly sot nta nta nta osa osa zma tae tae tae hvu bdi
Symbol LOC25490017 LOC100817082 AT5G21970 LOC103845583 LOC100855202 LOC107901014 LOC107961623 LOC106421231 LOC106371673 LOC102627144 LOC101267556 LOC102599599 LOC107815324 LOC107785500 LOC107777025 LOC4331835 LOC4350682 LOC100275356 LOC123084706 LOC123093396 LOC123098671 LOC123449619 LOC100834444
Function* protein WHAT'S THIS FACTOR 1 homolog, chloroplastic protein WHAT'S THIS FACTOR 1 homolog, chloroplastic Ubiquitin carboxyl-terminal hydrolase family protein protein WHAT'S THIS FACTOR 1 homolog, chloroplastic protein WHAT'S THIS FACTOR 1 homolog, chloroplastic protein WHAT'S THIS FACTOR 1 homolog, chloroplastic protein WHAT'S THIS FACTOR 1 homolog, chloroplastic protein WHAT'S THIS FACTOR 1 homolog, chloroplastic protein WHAT'S THIS FACTOR 1 homolog, chloroplastic protein WHAT'S THIS FACTOR 1 homolog, chloroplastic protein WHAT'S THIS FACTOR 1 homolog, chloroplastic protein ROOT PRIMORDIUM DEFECTIVE 1 protein WHAT'S THIS FACTOR 1 homolog, chloroplastic protein WHAT'S THIS FACTOR 1 homolog, chloroplastic protein WHAT'S THIS FACTOR 1 homolog, chloroplastic-like protein WHAT'S THIS FACTOR 1, chloroplastic protein WHAT'S THIS FACTOR 1, chloroplastic uncharacterized LOC100275356 protein WHAT'S THIS FACTOR 1 homolog, chloroplastic protein WHAT'S THIS FACTOR 1, chloroplastic protein WHAT'S THIS FACTOR 1 homolog, chloroplastic-like protein WHAT'S THIS FACTOR 1 homolog, chloroplastic protein WHAT'S THIS FACTOR 1 homolog
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 2
mtr03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
gma00730 Thiamine metabolism 2
gma01240 Biosynthesis of cofactors 2
gma04122 Sulfur relay system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
sot03013 Nucleocytoplasmic transport 2
sot03018 RNA degradation 2
sot03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04626 Plant-pathogen interaction 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 25490017 100817082 832257 103845583 100855202 107901014 107961623 106421231 106371673 102627144 101267556 102599599 107815324 107785500 107777025 4331835 4350682 100275356 123084706 123093396 123098671 123449619 100834444
The preparation time of this page was 0.1 [sec].