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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   100277643   uncharacterized LOC100277643 
 zma-r.6   100277643   uncharacterized LOC100277643 
 zma-m.5   100277643   uncharacterized LOC100277643 
 osa-u.5   4330494   pentatricopeptide repeat-containing protein At1g77360, mitochondrial 
 gma-u.5   100784707   pentatricopeptide repeat-containing protein At1g77360, mitochondrial 
 gma-u.5   100808606   pentatricopeptide repeat-containing protein At1g77360, mitochondrial 
 vvi-u.5   100265546   pentatricopeptide repeat-containing protein At1g77360, mitochondrial 
 ppo-u.5   18099371   pentatricopeptide repeat-containing protein At1g71060, mitochondrial 
 mtr-u.5   25489277   pentatricopeptide repeat-containing protein At1g77360, mitochondrial 

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Top 50 coexpressed genes to 100277643 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100277643 (zma-u.5 coexpression data)

CoexMap"100277643"


zmaLOC100277643 | Entrez gene ID : 100277643      
Species zma osa gma vvi ppo mtr sly sbi nta bra cre hvu cit bdi sot tae ath bna ghi
Paralog 3 1 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003729 [list] [network] mRNA binding  (346 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4389 genes)  IEA  
Protein NP_001144625.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  mito 3,  cyto 1,  cyto_mito 1,  mito_plas 1  (predict for NP_001144625.2)
Subcellular
localization
TargetP
other 4,  mito 3  (predict for NP_001144625.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
100277643

.
zma-r.6
for
100277643

.
zma-m.5
for
100277643

.
osa-u.5
for
4330494

.
gma-u.5
for
100784707

.
gma-u.5
for
100808606

.
vvi-u.5
for
100265546

.
ppo-u.5
for
18099371

.
mtr-u.5
for
25489277

.


Ortholog ID: 13282
Species gma gma osa zma vvi ppo mtr tae tae hvu ghi ghi sbi cit bdi
Symbol LOC100784707 LOC100808606 LOC4330494 LOC100277643 LOC100265546 LOC18099371 LOC25489277 LOC123145262 LOC123128161 LOC123401022 LOC107957893 LOC107905163 LOC110434914 LOC102607460 LOC100830825
Function* pentatricopeptide repeat-containing protein At1g77360, mitochondrial pentatricopeptide repeat-containing protein At1g77360, mitochondrial pentatricopeptide repeat-containing protein At1g77360, mitochondrial uncharacterized LOC100277643 pentatricopeptide repeat-containing protein At1g77360, mitochondrial pentatricopeptide repeat-containing protein At1g71060, mitochondrial pentatricopeptide repeat-containing protein At1g77360, mitochondrial pentatricopeptide repeat-containing protein At1g77360, mitochondrial pentatricopeptide repeat-containing protein At1g77360, mitochondrial pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like pentatricopeptide repeat-containing protein At1g77360, mitochondrial pentatricopeptide repeat-containing protein At1g77360, mitochondrial pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like pentatricopeptide repeat-containing protein At1g77360, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03015 mRNA surveillance pathway 2
gma03250 Viral life cycle - HIV-1 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00220 Arginine biosynthesis 2
zma00240 Pyrimidine metabolism 2
zma00250 Alanine, aspartate and glutamate metabolism 2
zma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 2
cit03013 Nucleocytoplasmic transport 2
cit04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 2
bdi03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100784707 100808606 4330494 100277643 100265546 18099371 25489277 123145262 123128161 123401022 107957893 107905163 110434914 102607460 100830825
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