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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123137964   pentatricopeptide repeat-containing protein At1g77360, mitochondrial 
 tae-r.2   123145262   pentatricopeptide repeat-containing protein At1g77360, mitochondrial 
 tae-r.2   123128161   pentatricopeptide repeat-containing protein At1g77360, mitochondrial 
 hvu-r.1   123401022   pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like 
 bdi-r.1   100830825   pentatricopeptide repeat-containing protein At1g77360, mitochondrial 
 osa-u.5   4330494   pentatricopeptide repeat-containing protein At1g77360, mitochondrial 
 zma-u.5   100277643   uncharacterized LOC100277643 
 sbi-r.1   110434914   pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like 
 gma-u.5   100784707   pentatricopeptide repeat-containing protein At1g77360, mitochondrial 
 gma-u.5   100808606   pentatricopeptide repeat-containing protein At1g77360, mitochondrial 
 vvi-u.5   100265546   pentatricopeptide repeat-containing protein At1g77360, mitochondrial 
 ppo-u.5   18099371   pentatricopeptide repeat-containing protein At1g71060, mitochondrial 
 mtr-u.5   25489277   pentatricopeptide repeat-containing protein At1g77360, mitochondrial 
 ghi-r.1   107905163   pentatricopeptide repeat-containing protein At1g77360, mitochondrial 
 ghi-r.1   107957893   pentatricopeptide repeat-containing protein At1g77360, mitochondrial 
 cit-r.1   102607460   pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like 

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Top 50 coexpressed genes to 123137964 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123137964 (tae-r.2 coexpression data)

CoexMap"123137964"


taeLOC123137964 | Entrez gene ID : 123137964    
Species tae hvu bdi osa zma sbi gma vvi ppo mtr ghi cit sot bra cre bna ath sly nta
Paralog 3 1 1 1 1 1 2 1 1 1 2 1 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003729 [list] [network] mRNA binding  (862 genes)  IEA  
GO:0005515 [list] [network] protein binding  (16249 genes)  IEA  
Protein XP_044413789.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  nucl 3,  nucl_plas 2,  cyto_pero 2,  cyto_E.R. 2  (predict for XP_044413789.1)
Subcellular
localization
TargetP
other 7  (predict for XP_044413789.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123137964
tae-r.2
for
123145262
tae-r.2
for
123128161
hvu-r.1
for
123401022
bdi-r.1
for
100830825
osa-u.5
for
4330494
zma-u.5
for
100277643
sbi-r.1
for
110434914
gma-u.5
for
100784707
gma-u.5
for
100808606
vvi-u.5
for
100265546
ppo-u.5
for
18099371
mtr-u.5
for
25489277
ghi-r.1
for
107905163
ghi-r.1
for
107957893
cit-r.1
for
102607460


Ortholog ID: 13282
Species tae tae tae hvu bdi osa zma sbi gma gma vvi ppo mtr ghi ghi cit
Symbol LOC123137964 LOC123145262 LOC123128161 LOC123401022 LOC100830825 LOC4330494 LOC100277643 LOC110434914 LOC100784707 LOC100808606 LOC100265546 LOC18099371 LOC25489277 LOC107905163 LOC107957893 LOC102607460
Function* pentatricopeptide repeat-containing protein At1g77360, mitochondrial pentatricopeptide repeat-containing protein At1g77360, mitochondrial pentatricopeptide repeat-containing protein At1g77360, mitochondrial pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like pentatricopeptide repeat-containing protein At1g77360, mitochondrial pentatricopeptide repeat-containing protein At1g77360, mitochondrial uncharacterized LOC100277643 pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like pentatricopeptide repeat-containing protein At1g77360, mitochondrial pentatricopeptide repeat-containing protein At1g77360, mitochondrial pentatricopeptide repeat-containing protein At1g77360, mitochondrial pentatricopeptide repeat-containing protein At1g71060, mitochondrial pentatricopeptide repeat-containing protein At1g77360, mitochondrial pentatricopeptide repeat-containing protein At1g77360, mitochondrial pentatricopeptide repeat-containing protein At1g77360, mitochondrial pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 2
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00220 Arginine biosynthesis 2
zma00240 Pyrimidine metabolism 2
zma00250 Alanine, aspartate and glutamate metabolism 2
zma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03015 mRNA surveillance pathway 2
gma03250 Viral life cycle - HIV-1 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 2
cit03013 Nucleocytoplasmic transport 2
cit04144 Endocytosis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123137964 123145262 123128161 123401022 100830825 4330494 100277643 110434914 100784707 100808606 100265546 18099371 25489277 107905163 107957893 102607460
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