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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   100279479   Tetratricopeptide repeat (TPR)-like superfamily protein 
 zma-r.6   100279479   Tetratricopeptide repeat (TPR)-like superfamily protein 
 bdi-r.1   100824119   pentatricopeptide repeat-containing protein At3g24000, mitochondrial 
 ath-u.5   AT3G24000   Tetratricopeptide repeat (TPR)-like superfamily protein 
 sly-u.5   101265195   pentatricopeptide repeat-containing protein At3g24000, mitochondrial 
 bra-r.6   103834433   pentatricopeptide repeat-containing protein At3g24000, mitochondrial 
 vvi-u.5   104878410   pentatricopeptide repeat-containing protein At3g24000, mitochondrial 
 ppo-u.5   7489184   pentatricopeptide repeat-containing protein At3g24000, mitochondrial 
 mtr-u.5   11434632   pentatricopeptide repeat-containing protein At3g24000, mitochondrial 
 ghi-r.1   121213734   pentatricopeptide repeat-containing protein At3g24000, mitochondrial 
 ghi-r.1   121203720   pentatricopeptide repeat-containing protein At3g24000, mitochondrial 
 sot-r.1   102579115   pentatricopeptide repeat-containing protein At3g24000, mitochondrial 
 cit-r.1   102626348   pentatricopeptide repeat-containing protein At3g24000, mitochondrial 
 nta-r.1   107787702   pentatricopeptide repeat-containing protein At3g24000, mitochondrial 
 nta-r.1   107761804   pentatricopeptide repeat-containing protein At3g24000, mitochondrial-like 

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Top 50 coexpressed genes to 100279479 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100279479 (zma-u.5 coexpression data)

CoexMap"100279479"


zmaLOC100279479 | Entrez gene ID : 100279479      
Species zma bdi ath sly bra vvi ppo mtr ghi sot cit nta osa tae bna cre sbi gma hvu
Paralog 2 1 1 1 1 1 1 1 2 1 1 2 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (350 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (807 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1549 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4389 genes)  IEA  
Protein NP_001145953.1 [sequence] [blastp]
XP_008651312.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  pero 2,  nucl 1,  mito 1  (predict for NP_001145953.1)
mito 8,  chlo_mito 5,  chlo 1  (predict for XP_008651312.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001145953.1)
mito 8  (predict for XP_008651312.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
100279479
zma-r.6
for
100279479
bdi-r.1
for
100824119
ath-u.5
for
AT3G24000
sly-u.5
for
101265195
bra-r.6
for
103834433
vvi-u.5
for
104878410
ppo-u.5
for
7489184
mtr-u.5
for
11434632
ghi-r.1
for
121213734
ghi-r.1
for
121203720
sot-r.1
for
102579115
cit-r.1
for
102626348
nta-r.1
for
107787702
nta-r.1
for
107761804


Ortholog ID: 10792
Species zma bdi ath sly bra vvi ppo mtr ghi ghi sot cit nta nta
Symbol LOC100279479 LOC100824119 AT3G24000 LOC101265195 LOC103834433 LOC104878410 LOC7489184 LOC11434632 LOC121213734 LOC121203720 LOC102579115 LOC102626348 LOC107787702 LOC107761804
Function* Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At3g24000, mitochondrial Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At3g24000, mitochondrial pentatricopeptide repeat-containing protein At3g24000, mitochondrial pentatricopeptide repeat-containing protein At3g24000, mitochondrial pentatricopeptide repeat-containing protein At3g24000, mitochondrial pentatricopeptide repeat-containing protein At3g24000, mitochondrial pentatricopeptide repeat-containing protein At3g24000, mitochondrial pentatricopeptide repeat-containing protein At3g24000, mitochondrial pentatricopeptide repeat-containing protein At3g24000, mitochondrial pentatricopeptide repeat-containing protein At3g24000, mitochondrial pentatricopeptide repeat-containing protein At3g24000, mitochondrial pentatricopeptide repeat-containing protein At3g24000, mitochondrial-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03082 ATP-dependent chromatin remodeling 2
ath03083 Polycomb repressive complex 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100279479 100824119 821984 101265195 103834433 104878410 7489184 11434632 121213734 121203720 102579115 102626348 107787702 107761804
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