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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1  107787702  pentatricopeptide repeat-containing protein At3g24000, mitochondrial 
 sly-u.5  101265195  pentatricopeptide repeat-containing protein At3g24000, mitochondrial 
 ath-u.5  AT3G24000  Tetratricopeptide repeat (TPR)-like superfamily protein 
 vvi-u.5  104878410  pentatricopeptide repeat-containing protein At3g24000, mitochondrial 
 ppo-u.5  7489184  pentatricopeptide repeat-containing protein At3g24000, mitochondrial 
 mtr-u.5  11434632  pentatricopeptide repeat-containing protein At3g24000, mitochondrial 
 zma-u.5  100279479  Tetratricopeptide repeat (TPR)-like superfamily protein 

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Top 50 coexpressed genes to 107787702 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107787702 (nta-r.1 coexpression data)

CoexMap"107787702"


ntaLOC107787702 | Entrez gene ID : 107787702
Species nta sly ath vvi ppo mtr zma hvu bna cit bra ghi osa sbi bdi gma tae cre sot
Paralog 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (732 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (2210 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (2607 genes)  IEA  
GO:0005515 [list] [network] protein binding  (7685 genes)  IEA  
Protein XP_016464789.1 [sequence] [blastp]
XP_016464790.1 [sequence] [blastp]
XP_075081043.1 [sequence] [blastp]
XP_075081044.1 [sequence] [blastp]
XP_075081045.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 4  (predict for XP_016464789.1)
chlo 6,  mito 4  (predict for XP_016464790.1)
chlo 6,  mito 4  (predict for XP_075081043.1)
chlo 6,  mito 4  (predict for XP_075081044.1)
chlo 6,  mito 4  (predict for XP_075081045.1)
Subcellular
localization
TargetP
scret 2  (predict for XP_016464789.1)
scret 2  (predict for XP_016464790.1)
scret 2  (predict for XP_075081043.1)
scret 2  (predict for XP_075081044.1)
scret 2  (predict for XP_075081045.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

nta-r.1
for
107787702


sly-u.5
for
101265195


ath-u.5
for
AT3G24000


vvi-u.5
for
104878410


ppo-u.5
for
7489184


mtr-u.5
for
11434632


zma-u.5
for
100279479



Ortholog ID: 10792
Species nta nta sly sot ath bra vvi ppo mtr ghi ghi cit zma bdi
Symbol LOC107761804 LOC107787702 LOC101265195 LOC102579115 AT3G24000 LOC103834433 LOC104878410 LOC7489184 LOC11434632 LOC121203720 LOC121213734 LOC102626348 LOC100279479 LOC100824119
Function* pentatricopeptide repeat-containing protein At3g24000, mitochondrial-like pentatricopeptide repeat-containing protein At3g24000, mitochondrial pentatricopeptide repeat-containing protein At3g24000, mitochondrial pentatricopeptide repeat-containing protein At3g24000, mitochondrial Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At3g24000, mitochondrial pentatricopeptide repeat-containing protein At3g24000, mitochondrial pentatricopeptide repeat-containing protein At3g24000, mitochondrial pentatricopeptide repeat-containing protein At3g24000, mitochondrial pentatricopeptide repeat-containing protein At3g24000, mitochondrial pentatricopeptide repeat-containing protein At3g24000, mitochondrial pentatricopeptide repeat-containing protein At3g24000, mitochondrial Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At3g24000, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03082 ATP-dependent chromatin remodeling 2
ath03083 Polycomb repressive complex 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107761804 107787702 101265195 102579115 821984 103834433 104878410 7489184 11434632 121203720 121213734 102626348 100279479 100824119
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