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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   100281981   uncharacterized LOC100281981 
 zma-r.6   100281981   uncharacterized LOC100281981 
 zma-m.5   100281981   uncharacterized LOC100281981 
 zma-u.5   100382393   uncharacterized LOC100382393 
 osa-u.5   4334543   splicing factor 3B subunit 6-like protein 
 ath-u.5   AT5G12190   RNA-binding (RRM/RBD/RNP motifs) family protein 
 gma-u.5   100802877   splicing factor 3B subunit 6-like protein 
 gma-u.5   100783741   splicing factor 3B subunit 6-like protein 
 sly-u.5   101267636   RNA recognition motif (RRM) domain-containg protein 
 vvi-u.5   100258249   splicing factor 3B subunit 6-like protein 
 ppo-u.5   7463876   splicing factor 3B subunit 6-like protein 
 ppo-u.5   7454882   splicing factor 3B subunit 6-like protein 
 mtr-u.5   11431415   splicing factor 3B subunit 6-like protein 

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Top 50 coexpressed genes to 100281981 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100281981 (zma-u.5 coexpression data)

CoexMap"100281981"


zmaLOC100281981 | Entrez gene ID : 100281981    
Species zma osa ath gma sly vvi ppo mtr sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 4 1 1 2 1 1 2 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG zma03040 [list] [network] Spliceosome (506 genes)
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (3371 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (5465 genes)  IEA  
GO MF
GO:0003729 [list] [network] mRNA binding  (346 genes)  IEA  
Protein NP_001353110.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  mito 4,  nucl 3  (predict for NP_001353110.1)
Subcellular
localization
TargetP
mito 7,  other 3  (predict for NP_001353110.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
100281981

.
zma-r.6
for
100281981

.
zma-m.5
for
100281981

.
zma-u.5
for
100382393

.
osa-u.5
for
4334543

.
ath-u.5
for
AT5G12190

.
gma-u.5
for
100802877

.
gma-u.5
for
100783741

.
sly-u.5
for
101267636

.
vvi-u.5
for
100258249

.
ppo-u.5
for
7463876

.
ppo-u.5
for
7454882

.
mtr-u.5
for
11431415

.


Ortholog ID: 7147
Species ath gma gma sly osa zma zma bra bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT5G12190 LOC100802877 LOC100783741 LOC101267636 LOC4334543 LOC100281981 LOC100382393 LOC103846660 LOC103855957 LOC100258249 LOC7454882 LOC7463876 LOC11431415 LOC123105598 LOC123113908 LOC123452942 LOC107945084 LOC107939473 LOC106372354 LOC106424595 CHLRE_03g158950v5 LOC8057079 LOC102581420 LOC102627330 LOC100842900 LOC107816076 LOC107809274
Function* RNA-binding (RRM/RBD/RNP motifs) family protein splicing factor 3B subunit 6-like protein splicing factor 3B subunit 6-like protein RNA recognition motif (RRM) domain-containg protein splicing factor 3B subunit 6-like protein uncharacterized LOC100281981 uncharacterized LOC100382393 splicing factor 3B subunit 6-like protein splicing factor 3B subunit 6-like protein splicing factor 3B subunit 6-like protein splicing factor 3B subunit 6-like protein splicing factor 3B subunit 6-like protein splicing factor 3B subunit 6-like protein splicing factor 3B subunit 6-like protein splicing factor 3B subunit 6-like protein splicing factor 3B subunit 6-like protein splicing factor 3B subunit 6-like protein splicing factor 3B subunit 6-like protein splicing factor 3B subunit 6-like protein splicing factor 3B subunit 6-like protein uncharacterized protein splicing factor 3B subunit 6-like protein splicing factor 3B subunit 6-like protein splicing factor 3B subunit 6-like protein splicing factor 3B subunit 6-like protein splicing factor 3B subunit 6-like protein splicing factor 3B subunit 6-like protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 5
ath04120 Ubiquitin mediated proteolysis 4
ath03420 Nucleotide excision repair 3
ath03040 Spliceosome 3
ath03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 9
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
gma03250 Viral life cycle - HIV-1 2
gma01240 Biosynthesis of cofactors 2
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 3
sly00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 4
zma03020 RNA polymerase 3
zma03420 Nucleotide excision repair 3
zma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 4
zma04141 Protein processing in endoplasmic reticulum 3
zma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04141 Protein processing in endoplasmic reticulum 2
vvi04144 Endocytosis 2
vvi04145 Phagosome 2
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 3
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 4
mtr04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 6
tae03013 Nucleocytoplasmic transport 3
tae03015 mRNA surveillance pathway 3
tae03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 6
tae03013 Nucleocytoplasmic transport 3
tae03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03050 Proteasome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 4
ghi04070 Phosphatidylinositol signaling system 4
ghi04075 Plant hormone signal transduction 4
ghi04626 Plant-pathogen interaction 4
ghi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 8
ghi04075 Plant hormone signal transduction 8
ghi04070 Phosphatidylinositol signaling system 6
ghi04626 Plant-pathogen interaction 6
ghi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 5
bna03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 6
bna03040 Spliceosome 4
bna03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 5
cre04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 3
sbi03060 Protein export 2
sbi03040 Spliceosome 2
sbi03420 Nucleotide excision repair 2
sbi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 8
sot03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
nta03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03060 Protein export 2
nta03040 Spliceosome 2
nta03050 Proteasome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 831092 100802877 100783741 101267636 4334543 100281981 100382393 103846660 103855957 100258249 7454882 7463876 11431415 123105598 123113908 123452942 107945084 107939473 106372354 106424595 5723015 8057079 102581420 102627330 100842900 107816076 107809274
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