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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   100282775   uncharacterized LOC100282775 
 zma-r.6   100282775   uncharacterized LOC100282775 
 sbi-r.1   8073176   protein RMD5 homolog A 
 osa-u.5   4341403   protein RMD5 homolog 
 tae-r.2   123157407   protein RMD5 homolog 
 tae-r.2   123071322   protein RMD5 homolog 
 tae-r.2   123079661   protein RMD5 homolog 
 hvu-r.1   123444964   protein RMD5 homolog 
 hvu-r.1   123409735   protein RMD5 homolog 
 hvu-r.1   123403486   protein RMD5 homolog 
 bdi-r.1   100827965   protein RMD5 homolog 
 bdi-r.1   100835107   protein RMD5 homolog 
 ath-u.5   AT2G22690   zinc ion binding protein 
 ath-u.5   AT4G37880   LisH/CRA/RING-U-box domains-containing protein 
 ath-u.5   AT5G09630   LisH/CRA/RING-U-box domains-containing protein 
 gma-u.5   100799584   protein RMD5 homolog 
 gma-u.5   100792593   protein RMD5 homolog 
 gma-u.5   100788371   protein RMD5 homolog 
 sly-u.5   101249974   protein RMD5 homolog 
 bra-r.6   103856919   protein RMD5 homolog 
 vvi-u.5   100252683   protein RMD5 homolog 
 ppo-u.5   7481820   protein RMD5 homolog 
 ppo-u.5   7478687   protein RMD5 homolog 
 ppo-u.5   7478770   protein RMD5 homolog 
 mtr-u.5   11437981   protein RMD5 homolog 
 mtr-u.5   11434344   protein RMD5 homolog 
 ghi-r.1   121209319   protein RMD5 homolog 
 ghi-r.1   121208262   protein RMD5 homolog 
 ghi-r.1   107950500   protein RMD5 homolog 
 bna-r.1   125605085   protein RMD5 homolog 
 bna-r.1   106389761   protein RMD5 homolog 
 bna-r.1   106361391   protein RMD5 homolog 
 sot-r.1   102586858   protein RMD5 homolog A 
 cit-r.1   102619036   protein RMD5 homolog 
 cit-r.1   102628081   protein RMD5 homolog 
 nta-r.1   107829980   protein RMD5 homolog 
 nta-r.1   107805440   protein RMD5 homolog 
 cre-r.1   CHLRE_11g467574v5   uncharacterized protein 

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Top 50 coexpressed genes to 100282775 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100282775 (zma-u.5 coexpression data)

CoexMap"100282775"


zmaLOC100282775 | Entrez gene ID : 100282775      
Species zma sbi osa tae hvu bdi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 2 1 1 3 3 2 3 3 1 1 1 3 2 3 3 1 2 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0043161 [list] [network] proteasome-mediated ubiquitin-dependent protein catabolic process  (134 genes)  IEA  
GO CC
GO:0034657 [list] [network] GID complex  (6 genes)  IEA  
GO:0005634 [list] [network] nucleus  (3371 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (5465 genes)  IEA  
GO MF
GO:0061630 [list] [network] ubiquitin protein ligase activity  (251 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4389 genes)  IEA  
Protein NP_001149153.2 [sequence] [blastp]
XP_008676793.1 [sequence] [blastp]
XP_008676800.1 [sequence] [blastp]
XP_008676805.1 [sequence] [blastp]
XP_008676809.1 [sequence] [blastp]
XP_035823103.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 3  (predict for NP_001149153.2)
nucl 6,  cyto 3  (predict for XP_008676793.1)
nucl 6,  cyto 3  (predict for XP_008676800.1)
nucl 6,  cyto 3  (predict for XP_008676805.1)
nucl 6,  cyto 3  (predict for XP_008676809.1)
nucl 6,  cyto 3  (predict for XP_035823103.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001149153.2)
other 8  (predict for XP_008676793.1)
other 8  (predict for XP_008676800.1)
other 8  (predict for XP_008676805.1)
other 8  (predict for XP_008676809.1)
other 8  (predict for XP_035823103.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
100282775
zma-r.6
for
100282775
sbi-r.1
for
8073176
osa-u.5
for
4341403
tae-r.2
for
123157407
tae-r.2
for
123071322
tae-r.2
for
123079661
hvu-r.1
for
123444964
hvu-r.1
for
123409735
hvu-r.1
for
123403486
bdi-r.1
for
100827965
bdi-r.1
for
100835107
ath-u.5
for
AT2G22690
ath-u.5
for
AT4G37880
ath-u.5
for
AT5G09630
gma-u.5
for
100799584
gma-u.5
for
100792593
gma-u.5
for
100788371
sly-u.5
for
101249974
bra-r.6
for
103856919
vvi-u.5
for
100252683
ppo-u.5
for
7481820
ppo-u.5
for
7478687
ppo-u.5
for
7478770
mtr-u.5
for
11437981
mtr-u.5
for
11434344
ghi-r.1
for
121209319
ghi-r.1
for
121208262
ghi-r.1
for
107950500
bna-r.1
for
125605085
bna-r.1
for
106389761
bna-r.1
for
106361391
sot-r.1
for
102586858
cit-r.1
for
102619036
cit-r.1
for
102628081
nta-r.1
for
107829980
nta-r.1
for
107805440
cre-r.1
for
CHLRE_11g467574v5


Ortholog ID: 3304
Species zma sbi osa tae tae tae hvu hvu hvu bdi bdi ath ath ath gma gma gma sly bra vvi ppo ppo ppo mtr mtr ghi ghi ghi bna bna bna sot cit cit nta nta cre
Symbol LOC100282775 LOC8073176 LOC4341403 LOC123071322 LOC123165746 LOC123148091 LOC123444964 LOC123409735 LOC123403486 LOC100827965 LOC100835107 AT2G22690 AT4G37880 AT5G09630 LOC100799584 LOC100792593 LOC100782483 LOC101249974 LOC103856919 LOC100252683 LOC7481820 LOC7478687 LOC7482186 LOC11437981 LOC11434344 LOC107950500 LOC107945116 LOC107914351 LOC106389761 LOC106361391 LOC106426840 LOC102586858 LOC102619036 LOC102628081 LOC107829980 LOC107805440 CHLRE_11g467574v5
Function* uncharacterized LOC100282775 protein RMD5 homolog A protein RMD5 homolog protein RMD5 homolog protein RMD5 homolog protein RMD5 homolog protein RMD5 homolog protein RMD5 homolog protein RMD5 homolog protein RMD5 homolog protein RMD5 homolog zinc ion binding protein LisH/CRA/RING-U-box domains-containing protein LisH/CRA/RING-U-box domains-containing protein protein RMD5 homolog protein RMD5 homolog protein RMD5 homolog protein RMD5 homolog protein RMD5 homolog protein RMD5 homolog protein RMD5 homolog protein RMD5 homolog protein RMD5 homolog protein RMD5 homolog protein RMD5 homolog protein RMD5 homolog protein RMD5 homolog protein RMD5 homolog protein RMD5 homolog protein RMD5 homolog protein RMD5 homolog protein RMD5 homolog A protein RMD5 homolog protein RMD5 homolog protein RMD5 homolog protein RMD5 homolog uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 3
tae04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03050 Proteasome 2
hvu00071 Fatty acid degradation 2
hvu00410 beta-Alanine metabolism 2
hvu00640 Propanoate metabolism 2
hvu01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 2
bdi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04136 Autophagy - other 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04136 Autophagy - other 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03272 Virion - Hepatitis viruses 2
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 3
ghi04130 SNARE interactions in vesicular transport 2
ghi00740 Riboflavin metabolism 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03272 Virion - Hepatitis viruses 2
ghi04144 Endocytosis 2
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 5
bna04141 Protein processing in endoplasmic reticulum 2
bna04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 4
bna04141 Protein processing in endoplasmic reticulum 4
bna04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 3
bna04120 Ubiquitin mediated proteolysis 2
bna04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 4
sot04120 Ubiquitin mediated proteolysis 2
sot03008 Ribosome biogenesis in eukaryotes 2
sot03083 Polycomb repressive complex 2
sot04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
cit03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03050 Proteasome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 3
nta04075 Plant hormone signal transduction 3
nta04626 Plant-pathogen interaction 3
nta04136 Autophagy - other 2
nta00770 Pantothenate and CoA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 4
nta04075 Plant hormone signal transduction 4
nta04626 Plant-pathogen interaction 4
nta04136 Autophagy - other 2
nta03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04136 Autophagy - other 5
cre04145 Phagosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100282775 8073176 4341403 123071322 123165746 123148091 123444964 123409735 123403486 100827965 100835107 816800 829944 830822 100799584 100792593 100782483 101249974 103856919 100252683 7481820 7478687 7482186 11437981 11434344 107950500 107945116 107914351 106389761 106361391 106426840 102586858 102619036 102628081 107829980 107805440 5726948
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