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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   100285474   single-stranded DNA-binding protein 
 zma-r.6   100285474   single-stranded DNA-binding protein 
 zma-m.5   100285474   single-stranded DNA-binding protein 
 osa-u.5   4326564   single-stranded DNA-binding protein, mitochondrial 
 ath-u.5   AT3G18580   Nucleic acid-binding, OB-fold-like protein 
 gma-u.5   100809336   single-stranded DNA-binding protein, mitochondrial 
 sly-u.5   101262086   single-stranded DNA-binding protein, mitochondrial 
 vvi-u.5   100258550   single-stranded DNA-binding protein, mitochondrial 
 ppo-u.5   7490083   single-stranded DNA-binding protein, mitochondrial 
 mtr-u.5   11446584   single-stranded DNA-binding protein, mitochondrial 

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Top 50 coexpressed genes to 100285474 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100285474 (zma-u.5 coexpression data)

CoexMap"100285474"


zmaLOC100285474 | Entrez gene ID : 100285474      
Species zma osa ath gma sly vvi ppo mtr sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG zma03030 [list] [network] DNA replication (56 genes)
zma03430 [list] [network] Mismatch repair (39 genes)
zma03440 [list] [network] Homologous recombination (61 genes)
GO BP
GO:0051096 [list] [network] positive regulation of helicase activity  (6 genes)  IEA  
GO:0006264 [list] [network] mitochondrial DNA replication  (8 genes)  IEA  
GO CC
GO:0042645 [list] [network] mitochondrial nucleoid  (6 genes)  IEA  
GO MF
GO:0003697 [list] [network] single-stranded DNA binding  (80 genes)  IEA  
Protein NP_001357643.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 6,  chlo 3,  cyto_mito 3,  mito_plas 3  (predict for NP_001357643.1)
Subcellular
localization
TargetP
mito 7,  chlo 5  (predict for NP_001357643.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
100285474

.
zma-r.6
for
100285474

.
zma-m.5
for
100285474

.
osa-u.5
for
4326564

.
ath-u.5
for
AT3G18580

.
gma-u.5
for
100809336

.
sly-u.5
for
101262086

.
vvi-u.5
for
100258550

.
ppo-u.5
for
7490083

.
mtr-u.5
for
11446584

.


Ortholog ID: 9492
Species ath gma sly osa zma bra bra vvi ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol AT3G18580 LOC100809336 LOC101262086 LOC4326564 LOC100285474 LOC103837980 LOC103869549 LOC100258550 LOC7490083 LOC11446584 LOC123070212 LOC123061580 LOC123443961 LOC107913171 LOC107953645 LOC106394441 LOC106364764 LOC8054942 LOC102596968 LOC102620340 LOC100825922 LOC107816032 LOC107787390
Function* Nucleic acid-binding, OB-fold-like protein single-stranded DNA-binding protein, mitochondrial single-stranded DNA-binding protein, mitochondrial single-stranded DNA-binding protein, mitochondrial single-stranded DNA-binding protein single-stranded DNA-binding protein, mitochondrial single-stranded DNA-binding protein, mitochondrial single-stranded DNA-binding protein, mitochondrial single-stranded DNA-binding protein, mitochondrial single-stranded DNA-binding protein, mitochondrial single-stranded DNA-binding protein, mitochondrial single-stranded DNA-binding protein, mitochondrial single-stranded DNA-binding protein, mitochondrial single-stranded DNA-binding protein single-stranded DNA-binding protein single-stranded DNA-binding protein, mitochondrial single-stranded DNA-binding protein, mitochondrial single-stranded DNA-binding protein, mitochondrial single-stranded DNA-binding protein, mitochondrial single-stranded DNA-binding protein, mitochondrial single-stranded DNA-binding protein, mitochondrial single-stranded DNA-binding protein, mitochondrial single-stranded DNA-binding protein, mitochondrial-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 4
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 3
zma00290 Valine, leucine and isoleucine biosynthesis 2
zma00620 Pyruvate metabolism 2
zma01210 2-Oxocarboxylic acid metabolism 2
zma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 3
vvi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 3
tae03430 Mismatch repair 3
tae03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 6
tae03030 DNA replication 3
tae03430 Mismatch repair 3
tae03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03018 RNA degradation 3
hvu03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 5
ghi04626 Plant-pathogen interaction 2
ghi03030 DNA replication 2
ghi03430 Mismatch repair 2
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 5
ghi04626 Plant-pathogen interaction 2
ghi03030 DNA replication 2
ghi03430 Mismatch repair 2
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03030 DNA replication 4
bna03430 Mismatch repair 4
bna03440 Homologous recombination 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03030 DNA replication 4
bna03430 Mismatch repair 4
bna03440 Homologous recombination 4
bna03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 3
sbi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 2
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 7
bdi03018 RNA degradation 2
bdi03010 Ribosome 2
bdi03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
nta03030 DNA replication 2
nta03430 Mismatch repair 2
nta03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03030 DNA replication 2
nta03430 Mismatch repair 2
nta03440 Homologous recombination 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 821389 100809336 101262086 4326564 100285474 103837980 103869549 100258550 7490083 11446584 123070212 123061580 123443961 107913171 107953645 106394441 106364764 8054942 102596968 102620340 100825922 107816032 107787390
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