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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101262086   single-stranded DNA-binding protein, mitochondrial 
 sly-r.6   101262086   single-stranded DNA-binding protein, mitochondrial 
 sot-r.1   102596968   single-stranded DNA-binding protein, mitochondrial 
 nta-r.1   107816032   single-stranded DNA-binding protein, mitochondrial 
 nta-r.1   107787390   single-stranded DNA-binding protein, mitochondrial-like 
 ath-u.5   AT3G18580   Nucleic acid-binding, OB-fold-like protein 
 gma-u.5   100809336   single-stranded DNA-binding protein, mitochondrial 
 bra-r.6   103869549   single-stranded DNA-binding protein, mitochondrial 
 bra-r.6   103837980   single-stranded DNA-binding protein, mitochondrial 
 vvi-u.5   100258550   single-stranded DNA-binding protein, mitochondrial 
 ppo-u.5   7490083   single-stranded DNA-binding protein, mitochondrial 
 mtr-u.5   11446584   single-stranded DNA-binding protein, mitochondrial 
 ghi-r.1   107953645   single-stranded DNA-binding protein 
 ghi-r.1   107913171   single-stranded DNA-binding protein 
 bna-r.1   111212429   single-stranded DNA-binding protein, mitochondrial-like 
 bna-r.1   106364764   single-stranded DNA-binding protein, mitochondrial 
 bna-r.1   106379951   single-stranded DNA-binding protein, mitochondrial 
 cit-r.1   102620340   single-stranded DNA-binding protein, mitochondrial 
 osa-u.5   4326564   single-stranded DNA-binding protein, mitochondrial 
 zma-u.5   100285474   single-stranded DNA-binding protein 
 tae-r.2   123078651   single-stranded DNA-binding protein, mitochondrial 
 tae-r.2   123070212   single-stranded DNA-binding protein, mitochondrial 
 tae-r.2   123061580   single-stranded DNA-binding protein, mitochondrial 
 hvu-r.1   123443961   single-stranded DNA-binding protein, mitochondrial 
 sbi-r.1   8054942   single-stranded DNA-binding protein, mitochondrial 
 bdi-r.1   100825922   single-stranded DNA-binding protein, mitochondrial 

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Top 50 coexpressed genes to 101262086 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101262086 (sly-u.5 coexpression data)

CoexMap"101262086"


slyLOC101262086 | Entrez gene ID : 101262086    
Species sly sot nta ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 2 1 2 1 1 2 1 1 1 2 3 1 1 1 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sly03030 [list] [network] DNA replication (43 genes)
sly03430 [list] [network] Mismatch repair (34 genes)
sly03440 [list] [network] Homologous recombination (60 genes)
GO BP
GO:0051096 [list] [network] positive regulation of helicase activity  (5 genes)  IEA  
GO:0006264 [list] [network] mitochondrial DNA replication  (6 genes)  IEA  
GO CC
GO:0042645 [list] [network] mitochondrial nucleoid  (5 genes)  IEA  
GO MF
GO:0003697 [list] [network] single-stranded DNA binding  (57 genes)  IEA  
Protein XP_004252243.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 5,  chlo 3,  nucl 1  (predict for XP_004252243.1)
Subcellular
localization
TargetP
mito 3,  chlo 3  (predict for XP_004252243.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101262086
sly-r.6
for
101262086
sot-r.1
for
102596968
nta-r.1
for
107816032
nta-r.1
for
107787390
ath-u.5
for
AT3G18580
gma-u.5
for
100809336
bra-r.6
for
103869549
bra-r.6
for
103837980
vvi-u.5
for
100258550
ppo-u.5
for
7490083
mtr-u.5
for
11446584
ghi-r.1
for
107953645
ghi-r.1
for
107913171
bna-r.1
for
111212429
bna-r.1
for
106364764
bna-r.1
for
106379951
cit-r.1
for
102620340
osa-u.5
for
4326564
zma-u.5
for
100285474
tae-r.2
for
123078651
tae-r.2
for
123070212
tae-r.2
for
123061580
hvu-r.1
for
123443961
sbi-r.1
for
8054942
bdi-r.1
for
100825922


Ortholog ID: 9492
Species sly sot nta nta ath gma bra bra vvi ppo mtr ghi ghi bna bna bna cit osa zma tae tae tae hvu sbi bdi
Symbol LOC101262086 LOC102596968 LOC107816032 LOC107787390 AT3G18580 LOC100809336 LOC103869549 LOC103837980 LOC100258550 LOC7490083 LOC11446584 LOC107953645 LOC107913171 LOC111212429 LOC106364764 LOC106394441 LOC102620340 LOC4326564 LOC100285474 LOC123078651 LOC123070212 LOC123061580 LOC123443961 LOC8054942 LOC100825922
Function* single-stranded DNA-binding protein, mitochondrial single-stranded DNA-binding protein, mitochondrial single-stranded DNA-binding protein, mitochondrial single-stranded DNA-binding protein, mitochondrial-like Nucleic acid-binding, OB-fold-like protein single-stranded DNA-binding protein, mitochondrial single-stranded DNA-binding protein, mitochondrial single-stranded DNA-binding protein, mitochondrial single-stranded DNA-binding protein, mitochondrial single-stranded DNA-binding protein, mitochondrial single-stranded DNA-binding protein, mitochondrial single-stranded DNA-binding protein single-stranded DNA-binding protein single-stranded DNA-binding protein, mitochondrial-like single-stranded DNA-binding protein, mitochondrial single-stranded DNA-binding protein, mitochondrial single-stranded DNA-binding protein, mitochondrial single-stranded DNA-binding protein, mitochondrial single-stranded DNA-binding protein single-stranded DNA-binding protein, mitochondrial single-stranded DNA-binding protein, mitochondrial single-stranded DNA-binding protein, mitochondrial single-stranded DNA-binding protein, mitochondrial single-stranded DNA-binding protein, mitochondrial single-stranded DNA-binding protein, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
nta03030 DNA replication 2
nta03430 Mismatch repair 2
nta03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03030 DNA replication 2
nta03430 Mismatch repair 2
nta03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 3
vvi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 5
ghi04626 Plant-pathogen interaction 2
ghi03030 DNA replication 2
ghi03430 Mismatch repair 2
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 5
ghi04626 Plant-pathogen interaction 2
ghi03030 DNA replication 2
ghi03430 Mismatch repair 2
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03030 DNA replication 4
bna03430 Mismatch repair 4
bna03440 Homologous recombination 4
bna03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03030 DNA replication 4
bna03430 Mismatch repair 4
bna03440 Homologous recombination 4
bna03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03030 DNA replication 4
bna03430 Mismatch repair 4
bna03440 Homologous recombination 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 2
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 4
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 3
zma00290 Valine, leucine and isoleucine biosynthesis 2
zma00620 Pyruvate metabolism 2
zma01210 2-Oxocarboxylic acid metabolism 2
zma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 3
tae03030 DNA replication 3
tae03430 Mismatch repair 3
tae03440 Homologous recombination 3
tae00902 Monoterpenoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 3
tae03430 Mismatch repair 3
tae03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 6
tae03030 DNA replication 3
tae03430 Mismatch repair 3
tae03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03018 RNA degradation 3
hvu03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 3
sbi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 7
bdi03018 RNA degradation 2
bdi03010 Ribosome 2
bdi03030 DNA replication 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101262086 102596968 107816032 107787390 821389 100809336 103869549 103837980 100258550 7490083 11446584 107953645 107913171 111212429 106364764 106394441 102620340 4326564 100285474 123078651 123070212 123061580 123443961 8054942 100825922
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