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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   100285840   MPPN domain containing protein 
 zma-r.6   100285840   MPPN domain containing protein 
 zma-m.5   100285840   MPPN domain containing protein 
 zma-u.5   100194358   uncharacterized LOC100194358 
 zma-u.5   100216910   Nuclear pore complex protein NUP35 
 sbi-r.1   8080518   nuclear pore complex protein NUP35 
 osa-u.5   4327063   nuclear pore complex protein NUP35 
 osa-u.5   4339346   nuclear pore complex protein NUP35 
 tae-r.2   123077709   nuclear pore complex protein NUP35 
 tae-r.2   123069184   nuclear pore complex protein NUP35 
 hvu-r.1   123443114   nuclear pore complex protein NUP35 
 bdi-r.1   100842837   nuclear pore complex protein NUP35 
 ath-u.5   AT3G16310   mitotic phosphoprotein N' end (MPPN) family protein 
 gma-u.5   100803145   nuclear pore complex protein NUP35 
 gma-u.5   100783752   uncharacterized LOC100783752 
 sly-u.5   101258447   nuclear pore complex protein NUP35 
 bra-r.6   103869835   nuclear pore complex protein NUP35 
 vvi-u.5   100244686   nuclear pore complex protein NUP35 
 ppo-u.5   7475094   nuclear pore complex protein NUP35 
 mtr-u.5   11441996   nuclear pore complex protein NUP35 
 ghi-r.1   107913892   nuclear pore complex protein NUP35 
 ghi-r.1   107950618   nuclear pore complex protein NUP35 
 ghi-r.1   107951925   nuclear pore complex protein NUP35 
 bna-r.1   106452137   nuclear pore complex protein NUP35 
 bna-r.1   106452216   nuclear pore complex protein NUP35 
 sot-r.1   102582355   nuclear pore complex protein NUP35 
 cit-r.1   102630379   nuclear pore complex protein NUP35 
 nta-r.1   107795254   nuclear pore complex protein NUP35 
 nta-r.1   107792807   nuclear pore complex protein NUP35-like 
 cre-r.1   CHLRE_12g553050v5   uncharacterized protein 

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Top 50 coexpressed genes to 100285840 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100285840 (zma-u.5 coexpression data)

CoexMap"100285840"


zmaLOC100285840 | Entrez gene ID : 100285840      
Species zma sbi osa tae hvu bdi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 5 1 2 2 1 1 1 2 1 1 1 1 1 3 2 1 1 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG zma03013 [list] [network] Nucleocytoplasmic transport (144 genes)
GO BP
GO:0006607 [list] [network] NLS-bearing protein import into nucleus  (4 genes)  IEA  
GO:0006999 [list] [network] nuclear pore organization  (6 genes)  IEA  
GO CC
GO:0044615 [list] [network] nuclear pore nuclear basket  (3 genes)  IEA  
GO:0044613 [list] [network] nuclear pore central transport channel  (5 genes)  IEA  
GO:0031965 [list] [network] nuclear membrane  (6 genes)  IEA  
GO MF
GO:0017056 [list] [network] structural constituent of nuclear pore  (25 genes)  IEA  
GO:0005543 [list] [network] phospholipid binding  (147 genes)  IEA  
GO:0003676 [list] [network] nucleic acid binding  (4170 genes)  IEA  
Protein NP_001152202.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  mito 5,  chlo_mito 5  (predict for NP_001152202.1)
Subcellular
localization
TargetP
mito 5,  chlo 4  (predict for NP_001152202.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
100285840
zma-r.6
for
100285840
zma-m.5
for
100285840
zma-u.5
for
100194358
zma-u.5
for
100216910
sbi-r.1
for
8080518
osa-u.5
for
4327063
osa-u.5
for
4339346
tae-r.2
for
123077709
tae-r.2
for
123069184
hvu-r.1
for
123443114
bdi-r.1
for
100842837
ath-u.5
for
AT3G16310
gma-u.5
for
100803145
gma-u.5
for
100783752
sly-u.5
for
101258447
bra-r.6
for
103869835
vvi-u.5
for
100244686
ppo-u.5
for
7475094
mtr-u.5
for
11441996
ghi-r.1
for
107913892
ghi-r.1
for
107950618
ghi-r.1
for
107951925
bna-r.1
for
106452137
bna-r.1
for
106452216
sot-r.1
for
102582355
cit-r.1
for
102630379
nta-r.1
for
107795254
nta-r.1
for
107792807
cre-r.1
for
CHLRE_12g553050v5


Ortholog ID: 5996
Species zma zma zma sbi osa osa tae tae hvu bdi ath gma gma sly bra vvi ppo mtr ghi ghi ghi bna bna sot cit nta nta cre
Symbol LOC100285840 LOC100194358 LOC100216910 LOC8080518 LOC4327063 LOC4339346 LOC123077709 LOC123069184 LOC123443114 LOC100842837 AT3G16310 LOC100803145 LOC100783752 LOC101258447 LOC103869835 LOC100244686 LOC7475094 LOC11441996 LOC107950618 LOC107951925 LOC121208615 LOC106452137 LOC106452216 LOC102582355 LOC102630379 LOC107795254 LOC107792807 CHLRE_12g553050v5
Function* MPPN domain containing protein uncharacterized LOC100194358 Nuclear pore complex protein NUP35 nuclear pore complex protein NUP35 nuclear pore complex protein NUP35 nuclear pore complex protein NUP35 nuclear pore complex protein NUP35 nuclear pore complex protein NUP35 nuclear pore complex protein NUP35 nuclear pore complex protein NUP35 mitotic phosphoprotein N' end (MPPN) family protein nuclear pore complex protein NUP35 uncharacterized LOC100783752 nuclear pore complex protein NUP35 nuclear pore complex protein NUP35 nuclear pore complex protein NUP35 nuclear pore complex protein NUP35 nuclear pore complex protein NUP35 nuclear pore complex protein NUP35 nuclear pore complex protein NUP35 nuclear pore complex protein NUP35 nuclear pore complex protein NUP35 nuclear pore complex protein NUP35 nuclear pore complex protein NUP35 nuclear pore complex protein NUP35 nuclear pore complex protein NUP35 nuclear pore complex protein NUP35-like uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 3
zma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03013 Nucleocytoplasmic transport 5
osa03040 Spliceosome 3
osa03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 13
tae03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 8
tae03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 4
bdi03040 Spliceosome 2
bdi04141 Protein processing in endoplasmic reticulum 2
bdi03020 RNA polymerase 2
bdi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 5
ath03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 7
gma03013 Nucleocytoplasmic transport 2
gma00230 Purine metabolism 2
gma00240 Pyrimidine metabolism 2
gma01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 6
gma03410 Base excision repair 5
gma03420 Nucleotide excision repair 5
gma03430 Mismatch repair 5
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 3
sly03013 Nucleocytoplasmic transport 2
sly03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
ppo03013 Nucleocytoplasmic transport 2
ppo03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 4
mtr03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04814 Motor proteins 5
ghi00541 Biosynthesis of various nucleotide sugars 2
ghi01250 Biosynthesis of nucleotide sugars 2
ghi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 6
bna03015 mRNA surveillance pathway 4
bna03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 6
bna03015 mRNA surveillance pathway 4
bna03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 3
cit03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 5
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 5
nta03008 Ribosome biogenesis in eukaryotes 2
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03030 DNA replication 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100285840 100194358 100216910 8080518 4327063 4339346 123077709 123069184 123443114 100842837 820878 100803145 100783752 101258447 103869835 100244686 7475094 11441996 107950618 107951925 121208615 106452137 106452216 102582355 102630379 107795254 107792807 5719696
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