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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107950618   nuclear pore complex protein NUP35 
 ghi-r.1   107913892   nuclear pore complex protein NUP35 
 ghi-r.1   107951925   nuclear pore complex protein NUP35 
 ghi-r.1   121208615   nuclear pore complex protein NUP35 
 ath-u.5   AT3G16310   mitotic phosphoprotein N' end (MPPN) family protein 
 bra-r.6   103869835   nuclear pore complex protein NUP35 
 bna-r.1   106452137   nuclear pore complex protein NUP35 
 bna-r.1   106452216   nuclear pore complex protein NUP35 
 cit-r.1   102630379   nuclear pore complex protein NUP35 
 gma-u.5   100783752   uncharacterized LOC100783752 
 gma-u.5   100803145   nuclear pore complex protein NUP35 
 vvi-u.5   100244686   nuclear pore complex protein NUP35 
 ppo-u.5   7475094   nuclear pore complex protein NUP35 
 mtr-u.5   11441996   nuclear pore complex protein NUP35 
 sly-u.5   101258447   nuclear pore complex protein NUP35 
 sot-r.1   102582355   nuclear pore complex protein NUP35 
 nta-r.1   107792807   nuclear pore complex protein NUP35-like 
 nta-r.1   107795254   nuclear pore complex protein NUP35 
 osa-u.5   4339346   nuclear pore complex protein NUP35 
 osa-u.5   4327063   nuclear pore complex protein NUP35 
 zma-u.5   100194358   uncharacterized LOC100194358 
 zma-u.5   100216910   Nuclear pore complex protein NUP35 
 zma-u.5   100285840   MPPN domain containing protein 
 tae-r.2   123060590   nuclear pore complex protein NUP35 
 hvu-r.1   123443114   nuclear pore complex protein NUP35 
 sbi-r.1   8080518   nuclear pore complex protein NUP35 
 bdi-r.1   100842837   nuclear pore complex protein NUP35 
 cre-r.1   CHLRE_12g553050v5   uncharacterized protein 

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Top 50 coexpressed genes to 107950618 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107950618 (ghi-r.1 coexpression data)

CoexMap"107950618"


ghiLOC107950618 | Entrez gene ID : 107950618    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 1 1 2 1 2 1 1 1 1 1 2 2 3 1 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi03013 [list] [network] Nucleocytoplasmic transport (289 genes)
GO BP
GO:0006999 [list] [network] nuclear pore organization  (9 genes)  IEA  
GO:0006607 [list] [network] NLS-bearing protein import into nucleus  (35 genes)  IEA  
GO CC
GO:0044615 [list] [network] nuclear pore nuclear basket  (5 genes)  IEA  
GO:0031965 [list] [network] nuclear membrane  (10 genes)  IEA  
GO:0044613 [list] [network] nuclear pore central transport channel  (19 genes)  IEA  
GO MF
GO:0017056 [list] [network] structural constituent of nuclear pore  (43 genes)  IEA  
GO:0005543 [list] [network] phospholipid binding  (294 genes)  IEA  
GO:0003676 [list] [network] nucleic acid binding  (9083 genes)  IEA  
Protein XP_016740988.1 [sequence] [blastp]
XP_016740989.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 4,  chlo 3,  nucl 2,  cyto_nucl 1  (predict for XP_016740988.1)
mito 4,  chlo 3,  nucl 2,  cyto_nucl 1  (predict for XP_016740989.1)
Subcellular
localization
TargetP
mito 8  (predict for XP_016740988.1)
mito 8  (predict for XP_016740989.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107950618
ghi-r.1
for
107913892
ghi-r.1
for
107951925
ghi-r.1
for
121208615
ath-u.5
for
AT3G16310
bra-r.6
for
103869835
bna-r.1
for
106452137
bna-r.1
for
106452216
cit-r.1
for
102630379
gma-u.5
for
100783752
gma-u.5
for
100803145
vvi-u.5
for
100244686
ppo-u.5
for
7475094
mtr-u.5
for
11441996
sly-u.5
for
101258447
sot-r.1
for
102582355
nta-r.1
for
107792807
nta-r.1
for
107795254
osa-u.5
for
4339346
osa-u.5
for
4327063
zma-u.5
for
100194358
zma-u.5
for
100216910
zma-u.5
for
100285840
tae-r.2
for
123060590
hvu-r.1
for
123443114
sbi-r.1
for
8080518
bdi-r.1
for
100842837
cre-r.1
for
CHLRE_12g553050v5


Ortholog ID: 5996
Species ghi ghi ghi ath bra bna bna cit gma gma vvi ppo mtr sly sot nta nta osa osa zma zma zma tae tae hvu sbi bdi cre
Symbol LOC107950618 LOC107951925 LOC121208615 AT3G16310 LOC103869835 LOC106452137 LOC106452216 LOC102630379 LOC100783752 LOC100803145 LOC100244686 LOC7475094 LOC11441996 LOC101258447 LOC102582355 LOC107792807 LOC107795254 LOC4339346 LOC4327063 LOC100194358 LOC100216910 LOC100285840 LOC123069184 LOC123077709 LOC123443114 LOC8080518 LOC100842837 CHLRE_12g553050v5
Function* nuclear pore complex protein NUP35 nuclear pore complex protein NUP35 nuclear pore complex protein NUP35 mitotic phosphoprotein N' end (MPPN) family protein nuclear pore complex protein NUP35 nuclear pore complex protein NUP35 nuclear pore complex protein NUP35 nuclear pore complex protein NUP35 uncharacterized LOC100783752 nuclear pore complex protein NUP35 nuclear pore complex protein NUP35 nuclear pore complex protein NUP35 nuclear pore complex protein NUP35 nuclear pore complex protein NUP35 nuclear pore complex protein NUP35 nuclear pore complex protein NUP35-like nuclear pore complex protein NUP35 nuclear pore complex protein NUP35 nuclear pore complex protein NUP35 uncharacterized LOC100194358 Nuclear pore complex protein NUP35 MPPN domain containing protein nuclear pore complex protein NUP35 nuclear pore complex protein NUP35 nuclear pore complex protein NUP35 nuclear pore complex protein NUP35 nuclear pore complex protein NUP35 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04814 Motor proteins 5
ghi00541 Biosynthesis of various nucleotide sugars 2
ghi01250 Biosynthesis of nucleotide sugars 2
ghi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 5
ath03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 6
bna03015 mRNA surveillance pathway 4
bna03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 6
bna03015 mRNA surveillance pathway 4
bna03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 3
cit03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 6
gma03410 Base excision repair 5
gma03420 Nucleotide excision repair 5
gma03430 Mismatch repair 5
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 7
gma03013 Nucleocytoplasmic transport 2
gma00230 Purine metabolism 2
gma00240 Pyrimidine metabolism 2
gma01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
ppo03013 Nucleocytoplasmic transport 2
ppo03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 4
mtr03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 3
sly03013 Nucleocytoplasmic transport 2
sly03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 5
nta03008 Ribosome biogenesis in eukaryotes 2
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 5
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03013 Nucleocytoplasmic transport 5
osa03040 Spliceosome 3
osa03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 3
zma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 8
tae03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 13
tae03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 4
bdi03040 Spliceosome 2
bdi04141 Protein processing in endoplasmic reticulum 2
bdi03020 RNA polymerase 2
bdi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03030 DNA replication 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107950618 107951925 121208615 820878 103869835 106452137 106452216 102630379 100783752 100803145 100244686 7475094 11441996 101258447 102582355 107792807 107795254 4339346 4327063 100194358 100216910 100285840 123069184 123077709 123443114 8080518 100842837 5719696
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