ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
gma-u.5	100305556	uncharacterized LOC100305556
gma-r.7	100305556	uncharacterized LOC100305556
gma-m.5	100305556	uncharacterized LOC100305556
gma-u.5	100500073	60S ribosomal L22 family protein
gma-u.5	100305544	uncharacterized LOC100305544
gma-u.5	100499714	uncharacterized LOC100499714
mtr-u.5	11429584	60S ribosomal protein L22-3
mtr-u.5	11426422	60S ribosomal protein L22-2
mtr-u.5	11412472	60S ribosomal protein L22-2
ppo-u.5	7487786	60S ribosomal protein L22-2
ppo-u.5	7455994	60S ribosomal protein L22-2
ppo-u.5	18098657	60S ribosomal protein L22-2
ath-u.5	AT3G05560	Ribosomal L22e protein family
ath-u.5	AT5G27770	Ribosomal L22e protein family
vvi-u.5	100266503	large ribosomal subunit protein eL22z
vvi-u.5	100261409	large ribosomal subunit protein eL22z
vvi-u.5	100258955	large ribosomal subunit protein eL22z
sly-u.5	101258008	large ribosomal subunit protein eL22y
sly-u.5	101245794	large ribosomal subunit protein eL22z
sly-u.5	101245494	large ribosomal subunit protein eL22y
osa-u.5	4332802	large ribosomal subunit protein eL22z
osa-u.5	4344261	large ribosomal subunit protein eL22z
zma-u.5	100283043	60S ribosomal protein L22-like
zma-u.5	100283364	60S ribosomal protein L22-2
zma-u.5	100192778	60S ribosomal protein L22-2

Top 50 coexpressed genes to 100305556 (gma-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100305556 (gma-u.5 coexpression data)

CoexMap"100305556"

[Cytoscape]

Annotation

functional annotation

KEGG

gmx03010 [list] [network] Ribosome (1072 genes)

GO BP

GO:0002181 [list] [network] cytoplasmic translation

(114 genes)

IEA

GO CC

GO:0005840 [list] [network] ribosome

(633 genes)

IEA

GO MF

GO:0003735 [list] [network] structural constituent of ribosome	(610 genes)	IEA
GO:0003723 [list] [network] RNA binding	(2019 genes)	IEA

Protein

NP_001237039.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 3, nucl 1, chlo 1, mito 1, plas 1, chlo_mito 1, cysk_nucl 1, cyto_pero 1, mito_plas 1, cyto_E.R. 1

(predict for NP_001237039.1)

Subcellular
localization
TargetP

other 7, mito 3

(predict for NP_001237039.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	gma-u.5 for 100305556	gma-r.7 for 100305556	gma-m.5 for 100305556	gma-u.5 for 100500073	gma-u.5 for 100305544	gma-u.5 for 100499714	mtr-u.5 for 11429584	mtr-u.5 for 11426422	mtr-u.5 for 11412472	ppo-u.5 for 7487786	ppo-u.5 for 7455994	ppo-u.5 for 18098657	ath-u.5 for AT3G05560	ath-u.5 for AT5G27770	vvi-u.5 for 100266503	vvi-u.5 for 100261409	vvi-u.5 for 100258955	sly-u.5 for 101258008	sly-u.5 for 101245794	sly-u.5 for 101245494	osa-u.5 for 4332802	osa-u.5 for 4344261	zma-u.5 for 100283043	zma-u.5 for 100283364	zma-u.5 for 100192778

Ortholog

Ortholog ID: 1500

Species

gma

mtr

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

uncharacterized LOC100499714

60S ribosomal protein L22-2

60S ribosomal protein L22-3

60S ribosomal protein L22-2

Ribosomal L22e protein family

60S ribosomal protein L22-2

large ribosomal subunit protein eL22z

60S ribosomal protein L22-2

60S ribosomal protein L22-3

60S ribosomal protein L22-2

60S ribosomal protein L22-2-like

large ribosomal subunit protein eL22y

60S ribosomal protein L22-3-like

60S ribosomal protein L22-3

large ribosomal subunit protein eL22y

large ribosomal subunit protein eL22y-like

large ribosomal subunit protein eL22z

60S ribosomal protein L22-2

60S ribosomal protein L22-like

60S ribosomal protein L22-2

60S ribosomal protein L22-2-like

60S ribosomal protein L22-2

ribosomal protein L22

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	16

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	21

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	21

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	17

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03010	Ribosome	21

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	21

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	21

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	13

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	10

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	15
ghi03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	14
ghi03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	11

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	18

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	18

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	17

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03010	Ribosome	18

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	15

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	18

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	12

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	21

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	17

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03010	Ribosome	12

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03010	Ribosome	18

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	16

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	17

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03010	Ribosome	17

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03010	Ribosome	20

Expression

Expression pattern

Entrez Gene ID^*

100499714

100790071

11426422

11429584

7487786

7481725

819722

832839

103870812

103859100

100266503

100261409

107927068

107931201

106407439

106399304

102631252

102610337

101258008

101245494

102600083

102582943

142181173

107759189

4332802

4344261

100192778

100283043

123158034

123051581

123409688

123424745

8083646

8078541

100833661

100844501

5729217

The preparation time of this page was 0.5 [sec].


Species	gma	mtr	ppo	ath	vvi	sly	osa	zma	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	6	3	3	2	3	3	2	3	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100305556 (gma-u.5 coexpression data)

Top 50 enrichment test to 100305556 (gma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**