ATTED-II : GeneCoexpression result

Species	Gene	Description
gma-u.5	100305864	ribonuclease H-like superfamily protein
gma-r.7	100305864	ribonuclease H-like superfamily protein
gma-m.5	100305864	ribonuclease H-like superfamily protein
mtr-u.5	112421758	putative pre-16S rRNA nuclease
ppo-u.5	7479316	uncharacterized LOC7479316
ath-u.5	AT3G52905	Polynucleotidyl transferase, ribonuclease H-like superfamily protein
bra-r.6	103872151	putative pre-16S rRNA nuclease
vvi-u.5	100266792	uncharacterized LOC100266792
ghi-r.1	107936682	putative pre-16S rRNA nuclease
ghi-r.1	107962975	putative pre-16S rRNA nuclease
cit-r.1	102610643	uncharacterized LOC102610643
sly-u.5	101262873	uncharacterized LOC101262873
sot-r.1	102597279	putative pre-16S rRNA nuclease
nta-r.1	107801761	uncharacterized LOC107801761
nta-r.1	107773082	uncharacterized LOC107773082
osa-u.5	4326892	uncharacterized LOC4326892
zma-u.5	100217155	Polynucleotidyl transferase ribonuclease H-like superfamily protein
tae-r.2	123062155	putative pre-16S rRNA nuclease
tae-r.2	123070882	putative pre-16S rRNA nuclease
hvu-r.1	123444490	putative pre-16S rRNA nuclease
sbi-r.1	8079245	putative pre-16S rRNA nuclease
bdi-r.1	100833580	putative pre-16S rRNA nuclease

Annotation

functional annotation

KEGG

GO BP

GO:0000967 [list] [network] rRNA 5'-end processing

(9 genes)

IEA

GO CC

GO MF

Protein

NP_001237859.2 [sequence] [blastp]
XP_006572795.1 [sequence] [blastp]
XP_006572796.1 [sequence] [blastp]
XP_025985162.1 [sequence] [blastp]
XP_025985217.1 [sequence] [blastp]
XP_025985290.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 7, chlo 1, nucl 1, mito 1, plas 1, chlo_mito 1, nucl_plas 1, mito_plas 1	(predict for NP_001237859.2)
cyto 7, chlo 1, nucl 1, mito 1, plas 1, chlo_mito 1, nucl_plas 1, mito_plas 1	(predict for XP_006572795.1)
cyto 5, nucl 2, chlo 1, nucl_plas 1	(predict for XP_006572796.1)
cyto 7, chlo 1, nucl 1, mito 1, plas 1, chlo_mito 1, nucl_plas 1, mito_plas 1	(predict for XP_025985162.1)
cyto 7, chlo 1, nucl 1, mito 1, plas 1, chlo_mito 1, nucl_plas 1, mito_plas 1	(predict for XP_025985217.1)
cyto 7, chlo 1, nucl 1, mito 1, plas 1, chlo_mito 1, nucl_plas 1, mito_plas 1	(predict for XP_025985290.1)

Subcellular
localization
TargetP

mito 6, other 5	(predict for NP_001237859.2)
mito 6, other 5	(predict for XP_006572795.1)
mito 6, other 4	(predict for XP_006572796.1)
mito 6, other 5	(predict for XP_025985162.1)
mito 6, other 5	(predict for XP_025985217.1)
mito 6, other 5	(predict for XP_025985290.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	gma-u.5 for 100305864	gma-r.7 for 100305864	gma-m.5 for 100305864	mtr-u.5 for 112421758	ppo-u.5 for 7479316	ath-u.5 for AT3G52905	bra-r.6 for 103872151	vvi-u.5 for 100266792	ghi-r.1 for 107936682	ghi-r.1 for 107962975	cit-r.1 for 102610643	sly-u.5 for 101262873	sot-r.1 for 102597279	nta-r.1 for 107801761	nta-r.1 for 107773082	osa-u.5 for 4326892	zma-u.5 for 100217155	tae-r.2 for 123062155	tae-r.2 for 123070882	hvu-r.1 for 123444490	sbi-r.1 for 8079245	bdi-r.1 for 100833580

Ortholog

Ortholog ID: 9901

Species

gma

mtr

ppo

ath

bra

vvi

ghi

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

ribonuclease H-like superfamily protein