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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100306403   uncharacterized LOC100306403 
 gma-r.7   100306403   uncharacterized LOC100306403 
 gma-m.5   100306403   uncharacterized LOC100306403 
 gma-u.5   100793015   protein CURVATURE THYLAKOID 1B, chloroplastic 
 gma-u.5   100790668   protein CURVATURE THYLAKOID 1B, chloroplastic 
 gma-u.5   100306676   protein CURVATURE THYLAKOID 1B-like 
 mtr-u.5   25500606   protein CURVATURE THYLAKOID 1B, chloroplastic 
 mtr-u.5   11433472   protein CURVATURE THYLAKOID 1B, chloroplastic 
 ppo-u.5   7478806   protein CURVATURE THYLAKOID 1B, chloroplastic 
 ppo-u.5   7455368   protein CURVATURE THYLAKOID 1B, chloroplastic 
 ath-u.5   PSI-P   photosystem I P subunit 
 vvi-u.5   100248815   protein CURVATURE THYLAKOID 1B, chloroplastic 
 sly-u.5   101262260   protein CURVATURE THYLAKOID 1B, chloroplastic 
 osa-u.5   4343189   protein CURVATURE THYLAKOID 1B, chloroplastic 
 osa-u.5   4349239   protein CURVATURE THYLAKOID 1B, chloroplastic 
 zma-u.5   100283753   uncharacterized LOC100283753 
 zma-u.5   100191656   uncharacterized LOC100191656 

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Top 50 coexpressed genes to 100306403 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100306403 (gma-u.5 coexpression data)

CoexMap"100306403"


gmaLOC100306403 | Entrez gene ID : 100306403      
Species gma mtr ppo ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 6 2 2 1 1 1 2 2 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0009535 [list] [network] chloroplast thylakoid membrane  (205 genes)  IEA  
GO:0009579 [list] [network] thylakoid  (327 genes)  IEA  
GO MF
Protein NP_001238306.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for NP_001238306.2)
Subcellular
localization
TargetP
chlo 9  (predict for NP_001238306.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100306403

.
gma-r.7
for
100306403

.
gma-m.5
for
100306403

.
gma-u.5
for
100793015

.
gma-u.5
for
100790668

.
gma-u.5
for
100306676

.
mtr-u.5
for
25500606

.
mtr-u.5
for
11433472

.
ppo-u.5
for
7478806

.
ppo-u.5
for
7455368

.
ath-u.5
for
PSI-P

.
vvi-u.5
for
100248815

.
sly-u.5
for
101262260

.
osa-u.5
for
4343189

.
osa-u.5
for
4349239

.
zma-u.5
for
100283753

.
zma-u.5
for
100191656

.


Ortholog ID: 5718
Species ath gma gma sly osa osa zma zma bra vvi ppo ppo mtr mtr tae tae hvu ghi ghi bna bna sbi sbi sot cit bdi bdi nta nta
Symbol PSI-P LOC100790668 LOC100793015 LOC101262260 LOC4349239 LOC4343189 LOC100283753 LOC100191656 LOC103866429 LOC100248815 LOC7478806 LOC7455368 LOC11433472 LOC25500606 LOC123051088 LOC123188560 LOC123411091 LOC107922952 LOC107912278 LOC106450472 LOC106391968 LOC110434414 LOC8077266 LOC102602283 LOC102626754 LOC100834583 LOC100824106 LOC107763650 LOC107816925
Function* photosystem I P subunit protein CURVATURE THYLAKOID 1B, chloroplastic protein CURVATURE THYLAKOID 1B, chloroplastic protein CURVATURE THYLAKOID 1B, chloroplastic protein CURVATURE THYLAKOID 1B, chloroplastic protein CURVATURE THYLAKOID 1B, chloroplastic uncharacterized LOC100283753 uncharacterized LOC100191656 protein CURVATURE THYLAKOID 1B, chloroplastic protein CURVATURE THYLAKOID 1B, chloroplastic protein CURVATURE THYLAKOID 1B, chloroplastic protein CURVATURE THYLAKOID 1B, chloroplastic protein CURVATURE THYLAKOID 1B, chloroplastic protein CURVATURE THYLAKOID 1B, chloroplastic protein CURVATURE THYLAKOID 1B, chloroplastic protein CURVATURE THYLAKOID 1B, chloroplastic protein CURVATURE THYLAKOID 1B, chloroplastic-like protein CURVATURE THYLAKOID 1B, chloroplastic protein CURVATURE THYLAKOID 1B, chloroplastic protein CURVATURE THYLAKOID 1B, chloroplastic protein CURVATURE THYLAKOID 1B, chloroplastic protein CURVATURE THYLAKOID 1B, chloroplastic-like protein CURVATURE THYLAKOID 1B, chloroplastic protein CURVATURE THYLAKOID 1B, chloroplastic protein CURVATURE THYLAKOID 1B, chloroplastic protein CURVATURE THYLAKOID 1B, chloroplastic protein CURVATURE THYLAKOID 1B, chloroplastic protein CURVATURE THYLAKOID 1B, chloroplastic protein CURVATURE THYLAKOID 1B, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00195 Photosynthesis 12
ath00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00710 Carbon fixation by Calvin cycle 10
gma01200 Carbon metabolism 10
gma00030 Pentose phosphate pathway 3
gma00195 Photosynthesis 2
gma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00010 Glycolysis / Gluconeogenesis 3
gma01200 Carbon metabolism 3
gma00710 Carbon fixation by Calvin cycle 2
gma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00195 Photosynthesis 6
sly03010 Ribosome 5
sly01200 Carbon metabolism 3
sly00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00195 Photosynthesis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01200 Carbon metabolism 6
zma00710 Carbon fixation by Calvin cycle 4
zma01230 Biosynthesis of amino acids 4
zma00630 Glyoxylate and dicarboxylate metabolism 3
zma00010 Glycolysis / Gluconeogenesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01200 Carbon metabolism 5
vvi00195 Photosynthesis 4
vvi00630 Glyoxylate and dicarboxylate metabolism 4
vvi00710 Carbon fixation by Calvin cycle 3
vvi00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 9
ppo00196 Photosynthesis - antenna proteins 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01200 Carbon metabolism 5
mtr00195 Photosynthesis 4
mtr00710 Carbon fixation by Calvin cycle 4
mtr00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00710 Carbon fixation by Calvin cycle 5
tae01200 Carbon metabolism 5
tae00010 Glycolysis / Gluconeogenesis 3
tae00030 Pentose phosphate pathway 3
tae00051 Fructose and mannose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00195 Photosynthesis 4
tae01200 Carbon metabolism 3
tae00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00195 Photosynthesis 2
hvu01240 Biosynthesis of cofactors 2
hvu00710 Carbon fixation by Calvin cycle 2
hvu01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 11
sot01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00195 Photosynthesis 11
cit00630 Glyoxylate and dicarboxylate metabolism 2
cit01230 Biosynthesis of amino acids 2
cit00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00710 Carbon fixation by Calvin cycle 6
bdi01200 Carbon metabolism 6
bdi00630 Glyoxylate and dicarboxylate metabolism 5
bdi00195 Photosynthesis 4
bdi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01200 Carbon metabolism 10
bdi00710 Carbon fixation by Calvin cycle 8
bdi00630 Glyoxylate and dicarboxylate metabolism 7
bdi00195 Photosynthesis 2
bdi00910 Nitrogen metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00195 Photosynthesis 3
nta00480 Glutathione metabolism 2
nta00860 Porphyrin metabolism 2
nta00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00195 Photosynthesis 3
nta00010 Glycolysis / Gluconeogenesis 2
nta00030 Pentose phosphate pathway 2
nta00051 Fructose and mannose metabolism 2
nta00710 Carbon fixation by Calvin cycle 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 819295 100790668 100793015 101262260 4349239 4343189 100283753 100191656 103866429 100248815 7478806 7455368 11433472 25500606 123051088 123188560 123411091 107922952 107912278 106450472 106391968 110434414 8077266 102602283 102626754 100834583 100824106 107763650 107816925
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