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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100306486   uncharacterized LOC100306486 
 gma-r.7   100306486   uncharacterized LOC100306486 
 gma-m.5   100306486   uncharacterized LOC100306486 
 mtr-u.5   25484638   thioredoxin-like protein 4B 
 mtr-u.5   120577112   thioredoxin-like protein 4B 
 ppo-u.5   7470775   uncharacterized LOC7470775 
 ath-u.5   AT3G24730   mRNA splicing factor, thioredoxin-like U5 snRNP 
 bra-r.6   103860253   thioredoxin-like protein 4B 
 vvi-u.5   100240847   uncharacterized LOC100240847 
 ghi-r.1   121213779   thioredoxin-like protein 4B 
 ghi-r.1   107916781   thioredoxin-like protein 4B 
 cit-r.1   102626806   uncharacterized LOC102626806 
 sly-u.5   101244595   thioredoxin-like superfamily protein 
 sot-r.1   102603634   thioredoxin-like protein 4B 
 nta-r.1   107787993   uncharacterized LOC107787993 
 nta-r.1   107786868   uncharacterized LOC107786868 
 osa-u.5   4350321   uncharacterized LOC4350321 
 zma-u.5   100280892   thioredoxin-like protein 4B 
 tae-r.2   123096097   thioredoxin-like protein 4B 
 tae-r.2   123086885   thioredoxin-like protein 4B 
 hvu-r.1   123447749   thioredoxin-like protein 4B 
 sbi-r.1   8079205   thioredoxin-like protein 4B 
 bdi-r.1   100835883   thioredoxin-like protein 4B 

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Top 50 coexpressed genes to 100306486 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100306486 (gma-u.5 coexpression data)

CoexMap"100306486"


gmaLOC100306486 | Entrez gene ID : 100306486      
Species gma mtr ppo ath bra vvi ghi cit sly sot nta osa zma tae hvu sbi bdi bna cre
Paralog 3 2 1 1 1 1 2 1 1 1 2 1 1 2 1 1 1 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000398 [list] [network] mRNA splicing, via spliceosome  (282 genes)  IEA  
GO CC
GO:0005682 [list] [network] U5 snRNP  (28 genes)  IEA  
GO:0046540 [list] [network] U4/U6 x U5 tri-snRNP complex  (45 genes)  IEA  
GO:0005681 [list] [network] spliceosomal complex  (245 genes)  IEA  
GO MF
Protein NP_001235730.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 10  (predict for NP_001235730.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001235730.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100306486
gma-r.7
for
100306486
gma-m.5
for
100306486
mtr-u.5
for
25484638
mtr-u.5
for
120577112
ppo-u.5
for
7470775
ath-u.5
for
AT3G24730
bra-r.6
for
103860253
vvi-u.5
for
100240847
ghi-r.1
for
121213779
ghi-r.1
for
107916781
cit-r.1
for
102626806
sly-u.5
for
101244595
sot-r.1
for
102603634
nta-r.1
for
107787993
nta-r.1
for
107786868
osa-u.5
for
4350321
zma-u.5
for
100280892
tae-r.2
for
123096097
tae-r.2
for
123086885
hvu-r.1
for
123447749
sbi-r.1
for
8079205
bdi-r.1
for
100835883


Ortholog ID: 11323
Species gma mtr mtr ppo ath bra vvi ghi ghi cit sly sot nta nta osa zma tae tae hvu sbi bdi
Symbol LOC100306486 LOC25484638 LOC120577112 LOC7470775 AT3G24730 LOC103860253 LOC100240847 LOC121213779 LOC107916781 LOC102626806 LOC101244595 LOC102603634 LOC107787993 LOC107786868 LOC4350321 LOC100280892 LOC123096097 LOC123086885 LOC123447749 LOC8079205 LOC100835883
Function* uncharacterized LOC100306486 thioredoxin-like protein 4B thioredoxin-like protein 4B uncharacterized LOC7470775 mRNA splicing factor, thioredoxin-like U5 snRNP thioredoxin-like protein 4B uncharacterized LOC100240847 thioredoxin-like protein 4B thioredoxin-like protein 4B uncharacterized LOC102626806 thioredoxin-like superfamily protein thioredoxin-like protein 4B uncharacterized LOC107787993 uncharacterized LOC107786868 uncharacterized LOC4350321 thioredoxin-like protein 4B thioredoxin-like protein 4B thioredoxin-like protein 4B thioredoxin-like protein 4B thioredoxin-like protein 4B thioredoxin-like protein 4B
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04136 Autophagy - other 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 6
ghi04130 SNARE interactions in vesicular transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 7
ghi04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
sly03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00100 Steroid biosynthesis 3
tae03040 Spliceosome 3
tae04016 MAPK signaling pathway - plant 3
tae04075 Plant hormone signal transduction 3
tae04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
tae04144 Endocytosis 3
tae04814 Motor proteins 3
tae04820 Cytoskeleton in muscle cells 3
tae04016 MAPK signaling pathway - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04075 Plant hormone signal transduction 2
hvu03082 ATP-dependent chromatin remodeling 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100306486 25484638 120577112 7470775 822071 103860253 100240847 121213779 107916781 102626806 101244595 102603634 107787993 107786868 4350321 100280892 123096097 123086885 123447749 8079205 100835883
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