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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8079205   thioredoxin-like protein 4B 
 zma-u.5   100280892   thioredoxin-like protein 4B 
 osa-u.5   4350321   uncharacterized LOC4350321 
 ath-u.5   AT3G24730   mRNA splicing factor, thioredoxin-like U5 snRNP 
 gma-u.5   100306486   uncharacterized LOC100306486 
 sly-u.5   101244595   thioredoxin-like superfamily protein 
 vvi-u.5   100240847   uncharacterized LOC100240847 
 ppo-u.5   7470775   uncharacterized LOC7470775 
 mtr-u.5   25484638   thioredoxin-like protein 4B 
 mtr-u.5   120577112   thioredoxin-like protein 4B 

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Top 50 coexpressed genes to 8079205 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8079205 (sbi-r.1 coexpression data)

CoexMap"8079205"


sbiLOC8079205 | Entrez gene ID : 8079205      
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 1 1 1 1 1 1 1 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000398 [list] [network] mRNA splicing, via spliceosome  (170 genes)  IEA  
GO CC
GO:0005682 [list] [network] U5 snRNP  (19 genes)  IEA  
GO:0046540 [list] [network] U4/U6 x U5 tri-snRNP complex  (31 genes)  IEA  
GO:0005681 [list] [network] spliceosomal complex  (145 genes)  IEA  
GO MF
Protein XP_002461033.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  mito 1,  cysk 1,  cyto 1,  pero 1,  chlo_mito 1,  cyto_mito 1,  cyto_pero 1,  cysk_plas 1,  mito_plas 1  (predict for XP_002461033.1)
Subcellular
localization
TargetP
other 6  (predict for XP_002461033.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8079205

.
zma-u.5
for
100280892

.
osa-u.5
for
4350321

.
ath-u.5
for
AT3G24730

.
gma-u.5
for
100306486

.
sly-u.5
for
101244595

.
vvi-u.5
for
100240847

.
ppo-u.5
for
7470775

.
mtr-u.5
for
25484638

.
mtr-u.5
for
120577112

.


Ortholog ID: 11323
Species ath gma sly osa zma bra vvi ppo mtr mtr tae tae hvu ghi ghi sbi sot cit bdi nta nta
Symbol AT3G24730 LOC100306486 LOC101244595 LOC4350321 LOC100280892 LOC103860253 LOC100240847 LOC7470775 LOC120577112 LOC25484638 LOC123096097 LOC123086885 LOC123447749 LOC121213779 LOC107916781 LOC8079205 LOC102603634 LOC102626806 LOC100835883 LOC107786868 LOC107787993
Function* mRNA splicing factor, thioredoxin-like U5 snRNP uncharacterized LOC100306486 thioredoxin-like superfamily protein uncharacterized LOC4350321 thioredoxin-like protein 4B thioredoxin-like protein 4B uncharacterized LOC100240847 uncharacterized LOC7470775 thioredoxin-like protein 4B thioredoxin-like protein 4B thioredoxin-like protein 4B thioredoxin-like protein 4B thioredoxin-like protein 4B thioredoxin-like protein 4B thioredoxin-like protein 4B thioredoxin-like protein 4B thioredoxin-like protein 4B uncharacterized LOC102626806 thioredoxin-like protein 4B uncharacterized LOC107786868 uncharacterized LOC107787993
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
sly03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04136 Autophagy - other 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00100 Steroid biosynthesis 3
tae03040 Spliceosome 3
tae04016 MAPK signaling pathway - plant 3
tae04075 Plant hormone signal transduction 3
tae04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
tae04144 Endocytosis 3
tae04814 Motor proteins 3
tae04820 Cytoskeleton in muscle cells 3
tae04016 MAPK signaling pathway - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04075 Plant hormone signal transduction 2
hvu03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 6
ghi04130 SNARE interactions in vesicular transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 7
ghi04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03460 Fanconi anemia pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 822071 100306486 101244595 4350321 100280892 103860253 100240847 7470775 120577112 25484638 123096097 123086885 123447749 121213779 107916781 8079205 102603634 102626806 100835883 107786868 107787993
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