ATTED-II : GeneCoexpression result

Species	Gene	Description
zma-u.5	100382576	uncharacterized LOC100382576
zma-r.6	100382576	uncharacterized LOC100382576
osa-u.5	4342984	uncharacterized LOC4342984
ath-u.5	AT1G55040	zinc finger (Ran-binding) family protein
gma-u.5	102669955	uncharacterized LOC102669955
gma-u.5	100807006	uncharacterized LOC100807006
vvi-u.5	104881408	uncharacterized LOC104881408
ppo-u.5	18098784	uncharacterized LOC18098784
ppo-u.5	7473293	uncharacterized LOC7473293
mtr-u.5	11430549	uncharacterized LOC11430549

functional annotation

KEGG

GO BP

GO CC

GO:0005737 [list] [network] cytoplasm

(5465 genes)

IEA

GO MF

GO:0003729 [list] [network] mRNA binding

(346 genes)

IEA

Protein

NP_001348597.1 [sequence] [blastp]

Subcellular
localization
wolf

mito 5, chlo_mito 4, cyto_mito 3, chlo 2, nucl 2

(predict for NP_001348597.1)

Subcellular
localization
TargetP

mito 8

(predict for NP_001348597.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	zma-u.5 for 100382576	zma-r.6 for 100382576	osa-u.5 for 4342984	ath-u.5 for AT1G55040	gma-u.5 for 102669955	gma-u.5 for 100807006	vvi-u.5 for 104881408	ppo-u.5 for 18098784	ppo-u.5 for 7473293	mtr-u.5 for 11430549

Ortholog ID: 9849

Species

zma

sbi

osa

tae

hvu

bdi

ath

gma

bra

vvi

ppo

mtr

ghi

bna

sot

nta

Symbol

Function^*

uncharacterized LOC100382576

zinc finger protein VAR3, chloroplastic

uncharacterized LOC4342984

uncharacterized LOC123139135

uncharacterized LOC123145916

uncharacterized LOC123401252

uncharacterized LOC100846876

zinc finger (Ran-binding) family protein

uncharacterized LOC100807006

uncharacterized LOC102669955

uncharacterized LOC103838706

uncharacterized LOC104881408

uncharacterized LOC18098784

uncharacterized LOC7473293

uncharacterized LOC11430549

uncharacterized LOC107894321

uncharacterized LOC107958669

uncharacterized LOC106386727

uncharacterized LOC106433773

uncharacterized LOC102591527

uncharacterized LOC107831862

uncharacterized LOC107768023

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03008	Ribosome biogenesis in eukaryotes	3
sbi03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03008	Ribosome biogenesis in eukaryotes	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03020	RNA polymerase	5
tae03008	Ribosome biogenesis in eukaryotes	3
tae03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03020	RNA polymerase	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03008	Ribosome biogenesis in eukaryotes	5
hvu03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03008	Ribosome biogenesis in eukaryotes	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03008	Ribosome biogenesis in eukaryotes	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03008	Ribosome biogenesis in eukaryotes	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03008	Ribosome biogenesis in eukaryotes	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03008	Ribosome biogenesis in eukaryotes	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03008	Ribosome biogenesis in eukaryotes	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00860	Porphyrin metabolism	2
ghi00900	Terpenoid backbone biosynthesis	2
ghi03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03020	RNA polymerase	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03020	RNA polymerase	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03008	Ribosome biogenesis in eukaryotes	4
sot03020	RNA polymerase	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03008	Ribosome biogenesis in eukaryotes	7
nta03440	Homologous recombination	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03008	Ribosome biogenesis in eukaryotes	9

Expression

Expression pattern

Entrez Gene ID^*

100382576

8057319

4342984

123139135

123145916

123401252

100846876

841947

100807006

102669955

103838706

104881408

18098784

7473293

11430549

107894321

107958669

106386727

106433773

102591527

107831862

107768023

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100382576 (zma-u.5 coexpression data)

Top 50 enrichment test to 100382576 (zma-u.5 coexpression data)


Species	zma	osa	ath	gma	vvi	ppo	mtr	bdi	hvu	bra	cit	bna	sbi	sly	ghi	sot	nta	cre	tae
Paralog	2	1	1	2	1	2	1	0	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100382576 (zma-u.5 coexpression data)

Top 50 enrichment test to 100382576 (zma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**