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Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.5   4342984   uncharacterized LOC4342984 
 osa-r.6   4342984   uncharacterized LOC4342984 
 osa-m.8   4342984   uncharacterized LOC4342984 
 osa-e.1   4342984   uncharacterized LOC4342984 
 zma-u.5   100382576   uncharacterized LOC100382576 
 ath-u.5   AT1G55040   zinc finger (Ran-binding) family protein 
 gma-u.5   102669955   uncharacterized LOC102669955 
 gma-u.5   100807006   uncharacterized LOC100807006 
 vvi-u.5   104881408   uncharacterized LOC104881408 
 ppo-u.5   7473293   uncharacterized LOC7473293 
 ppo-u.5   18098784   uncharacterized LOC18098784 
 mtr-u.5   11430549   uncharacterized LOC11430549 

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Top 50 coexpressed genes to 4342984 (osa-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 4342984 (osa-u.5 coexpression data)

CoexMap"4342984"


osaLOC4342984 | Entrez gene ID : 4342984      
Species osa zma ath gma vvi ppo mtr tae hvu ghi bdi cit bra cre sbi bna sly nta sot
Paralog 4 1 1 2 1 2 1 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005737 [list] [network] cytoplasm  (5212 genes)  IEA  
GO MF
GO:0003729 [list] [network] mRNA binding  (333 genes)  IEA  
Protein XP_015647751.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  chlo_mito 4,  mito 3,  nucl 2,  cyto_mito 1  (predict for XP_015647751.2)
Subcellular
localization
TargetP
mito 8  (predict for XP_015647751.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.5
for
4342984

.
osa-r.6
for
4342984

.
osa-m.8
for
4342984

.
osa-e.1
for
4342984

.
zma-u.5
for
100382576

.
ath-u.5
for
AT1G55040

.
gma-u.5
for
102669955

.
gma-u.5
for
100807006

.
vvi-u.5
for
104881408

.
ppo-u.5
for
7473293

.
ppo-u.5
for
18098784

.
mtr-u.5
for
11430549

.


Ortholog ID: 9849
Species ath gma gma osa zma bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna sbi sot bdi nta nta
Symbol AT1G55040 LOC100807006 LOC102669955 LOC4342984 LOC100382576 LOC103838706 LOC104881408 LOC18098784 LOC7473293 LOC11430549 LOC123139135 LOC123145916 LOC123401252 LOC107894321 LOC107958669 LOC106386727 LOC106433773 LOC8057319 LOC102591527 LOC100846876 LOC107831862 LOC107768023
Function* zinc finger (Ran-binding) family protein uncharacterized LOC100807006 uncharacterized LOC102669955 uncharacterized LOC4342984 uncharacterized LOC100382576 uncharacterized LOC103838706 uncharacterized LOC104881408 uncharacterized LOC18098784 uncharacterized LOC7473293 uncharacterized LOC11430549 uncharacterized LOC123139135 uncharacterized LOC123145916 uncharacterized LOC123401252 uncharacterized LOC107894321 uncharacterized LOC107958669 uncharacterized LOC106386727 uncharacterized LOC106433773 zinc finger protein VAR3, chloroplastic uncharacterized LOC102591527 uncharacterized LOC100846876 uncharacterized LOC107831862 uncharacterized LOC107768023
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03020 RNA polymerase 5
tae03008 Ribosome biogenesis in eukaryotes 3
tae03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03020 RNA polymerase 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 5
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00860 Porphyrin metabolism 2
ghi00900 Terpenoid backbone biosynthesis 2
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 3
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 4
sot03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 7
nta03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 9
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 841947 100807006 102669955 4342984 100382576 103838706 104881408 18098784 7473293 11430549 123139135 123145916 123401252 107894321 107958669 106386727 106433773 8057319 102591527 100846876 107831862 107768023
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