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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100499878   elongation factor 1-delta 2-like 
 gma-r.7   100499878   elongation factor 1-delta 2-like 
 gma-u.5   100777627   elongation factor 1-delta 
 mtr-u.5   25488389   elongation factor 1-delta 
 mtr-u.5   25491521   elongation factor 1-delta 
 ppo-u.5   7454547   elongation factor 1-delta 1 
 ppo-u.5   7454706   elongation factor 1-delta 2 
 ath-u.5   AT2G18110   Translation elongation factor EF1B/ribosomal protein S6 family protein 
 ath-u.5   eEF-1Bb1   translation elongation factor EF1B/ribosomal protein S6 family protein 
 bra-r.6   103835229   elongation factor 1-delta 1 
 bra-r.6   103840424   elongation factor 1-delta 1 
 bra-r.6   103840528   elongation factor 1-delta 1-like 
 vvi-u.5   100252524   elongation factor 1-delta 
 ghi-r.1   107913416   elongation factor 1-delta 
 ghi-r.1   107942552   elongation factor 1-delta 
 ghi-r.1   121211069   elongation factor 1-delta 
 bna-r.1   106375934   elongation factor 1-delta 1-like 
 bna-r.1   106372073   elongation factor 1-delta 1-like 
 bna-r.1   106362443   elongation factor 1-delta 1 
 cit-r.1   102608130   elongation factor 1-delta 2 
 sly-u.5   DDTFR10   ripening regulated protein DDTFR10 
 sly-u.5   101247163   elongation factor 1-delta 1 
 sot-r.1   102593337   elongation factor 1-delta 1-like 
 sot-r.1   102604729   elongation factor 1-delta 1 
 nta-r.1   107819488   elongation factor 1-delta 1 
 nta-r.1   107791787   elongation factor 1-delta 1-like 
 osa-u.5   4333079   elongation factor 1-delta 2-like 
 osa-u.5   4343894   elongation factor 1-delta 1-like 
 zma-u.5   100283380   elongation factor 1-delta 1 
 zma-u.5   100282885   elongation factor 1-delta 1 
 tae-r.2   123044224   elongation factor 1-delta 1 
 tae-r.2   123187963   elongation factor 1-delta 1 
 tae-r.2   123052104   elongation factor 1-delta 1 
 hvu-r.1   123425324   elongation factor 1-delta 1-like 
 sbi-r.1   8079183   elongation factor 1-delta 1 
 sbi-r.1   8080430   elongation factor 1-delta 2 
 bdi-r.1   100836375   elongation factor 1-delta 2 
 bdi-r.1   100829465   elongation factor 1-delta 1 

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Top 50 coexpressed genes to 100499878 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100499878 (gma-u.5 coexpression data)

CoexMap"100499878"


gmaLOC100499878 | Entrez gene ID : 100499878    
Species gma mtr ppo ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 2 2 2 3 1 3 3 1 2 2 2 2 2 3 1 2 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006414 [list] [network] translational elongation  (65 genes)  IEA  
GO CC
GO:0005853 [list] [network] eukaryotic translation elongation factor 1 complex  (5 genes)  IEA  
GO:0005829 [list] [network] cytosol  (1702 genes)  IEA  
GO MF
GO:0003746 [list] [network] translation elongation factor activity  (46 genes)  IEA  
GO:0005085 [list] [network] guanyl-nucleotide exchange factor activity  (76 genes)  IEA  
Protein NP_001237305.2 [sequence] [blastp]
XP_040870432.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  chlo 3,  pero 2,  cyto_nucl 2,  cyto_E.R. 2,  cyto_plas 2  (predict for NP_001237305.2)
chlo 5,  vacu 1,  E.R._vacu 1,  E.R. 1,  nucl 1,  mito 1,  extr 1  (predict for XP_040870432.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001237305.2)
scret 9,  mito 3  (predict for XP_040870432.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100499878
gma-r.7
for
100499878
gma-u.5
for
100777627
mtr-u.5
for
25488389
mtr-u.5
for
25491521
ppo-u.5
for
7454547
ppo-u.5
for
7454706
ath-u.5
for
AT2G18110
ath-u.5
for
eEF-1Bb1
bra-r.6
for
103835229
bra-r.6
for
103840424
bra-r.6
for
103840528
vvi-u.5
for
100252524
ghi-r.1
for
107913416
ghi-r.1
for
107942552
ghi-r.1
for
121211069
bna-r.1
for
106375934
bna-r.1
for
106372073
bna-r.1
for
106362443
cit-r.1
for
102608130
sly-u.5
for
DDTFR10
sly-u.5
for
101247163
sot-r.1
for
102593337
sot-r.1
for
102604729
nta-r.1
for
107819488
nta-r.1
for
107791787
osa-u.5
for
4333079
osa-u.5
for
4343894
zma-u.5
for
100283380
zma-u.5
for
100282885
tae-r.2
for
123044224
tae-r.2
for
123187963
tae-r.2
for
123052104
hvu-r.1
for
123425324
sbi-r.1
for
8079183
sbi-r.1
for
8080430
bdi-r.1
for
100836375
bdi-r.1
for
100829465


Ortholog ID: 4680
Species gma gma mtr mtr ppo ppo ath ath bra bra bra vvi ghi ghi ghi bna bna bna cit sly sly sot sot nta nta osa osa zma zma tae tae tae hvu sbi sbi bdi bdi
Symbol LOC100499878 LOC100777627 LOC25488389 LOC25491521 LOC7454547 LOC7454706 AT2G18110 eEF-1Bb1 LOC103835229 LOC103840424 LOC103840528 LOC100252524 LOC107942552 LOC121211069 LOC121219937 LOC106372073 LOC106362443 LOC125578141 LOC102608130 DDTFR10 LOC101247163 LOC102593337 LOC102604729 LOC107819488 LOC107791787 LOC4333079 LOC4343894 LOC100283380 LOC100282885 LOC123044224 LOC123187963 LOC123052104 LOC123425324 LOC8079183 LOC8080430 LOC100836375 LOC100829465
Function* elongation factor 1-delta 2-like elongation factor 1-delta elongation factor 1-delta elongation factor 1-delta elongation factor 1-delta 1 elongation factor 1-delta 2 Translation elongation factor EF1B/ribosomal protein S6 family protein translation elongation factor EF1B/ribosomal protein S6 family protein elongation factor 1-delta 1 elongation factor 1-delta 1 elongation factor 1-delta 1-like elongation factor 1-delta elongation factor 1-delta elongation factor 1-delta elongation factor 1-delta elongation factor 1-delta 1-like elongation factor 1-delta 1 elongation factor 1-delta 1 elongation factor 1-delta 2 ripening regulated protein DDTFR10 elongation factor 1-delta 1 elongation factor 1-delta 1-like elongation factor 1-delta 1 elongation factor 1-delta 1 elongation factor 1-delta 1-like elongation factor 1-delta 2-like elongation factor 1-delta 1-like elongation factor 1-delta 1 elongation factor 1-delta 1 elongation factor 1-delta 1 elongation factor 1-delta 1 elongation factor 1-delta 1 elongation factor 1-delta 1-like elongation factor 1-delta 1 elongation factor 1-delta 2 elongation factor 1-delta 2 elongation factor 1-delta 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 13
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 18
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 12
bra03013 Nucleocytoplasmic transport 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 5
bna03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00220 Arginine biosynthesis 4
bna00240 Pyrimidine metabolism 4
bna00250 Alanine, aspartate and glutamate metabolism 4
bna01240 Biosynthesis of cofactors 4
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 3
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 10
nta03015 mRNA surveillance pathway 5
nta03013 Nucleocytoplasmic transport 4
nta03040 Spliceosome 4
nta03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 12
nta03013 Nucleocytoplasmic transport 4
nta03015 mRNA surveillance pathway 4
nta03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 7
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 6
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 6
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 8
hvu03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 5
sbi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 9
sbi04141 Protein processing in endoplasmic reticulum 3
sbi04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00010 Glycolysis / Gluconeogenesis 4
bdi01200 Carbon metabolism 4
bdi01230 Biosynthesis of amino acids 4
bdi03018 RNA degradation 2
bdi04820 Cytoskeleton in muscle cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 13
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100499878 100777627 25488389 25491521 7454547 7454706 816323 839903 103835229 103840424 103840528 100252524 107942552 121211069 121219937 106372073 106362443 125578141 102608130 543636 101247163 102593337 102604729 107819488 107791787 4333079 4343894 100283380 100282885 123044224 123187963 123052104 123425324 8079183 8080430 100836375 100829465
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