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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100500064   ribosomal protein L10 family protein 
 gma-r.7   100500064   ribosomal protein L10 family protein 
 gma-u.5   100305462   ribosomal protein L10 family protein 
 mtr-u.5   11418824   mRNA turnover protein 4 homolog 
 ppo-u.5   7490756   uncharacterized LOC7490756 
 ppo-u.5   7485154   uncharacterized LOC7485154 
 ath-u.5   AT1G25260   Ribosomal protein L10 family protein 
 vvi-u.5   100244591   uncharacterized LOC100244591 
 sly-u.5   101262055   uncharacterized LOC101262055 
 osa-u.5   9270809   uncharacterized LOC9270809 
 osa-u.5   4349548   uncharacterized LOC4349548 
 zma-u.5   100194040   ribosomal protein L10 homolog 
 zma-u.5   100282271   mRNA turnover protein 4 

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Top 50 coexpressed genes to 100500064 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100500064 (gma-u.5 coexpression data)

CoexMap"100500064"


gmaLOC100500064 | Entrez gene ID : 100500064      
Species gma mtr ppo ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 1 2 1 1 1 2 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000027 [list] [network] ribosomal large subunit assembly  (46 genes)  IEA  
GO:0000956 [list] [network] nuclear-transcribed mRNA catabolic process  (92 genes)  IEA  
GO:0042273 [list] [network] ribosomal large subunit biogenesis  (156 genes)  IEA  
GO:0006364 [list] [network] rRNA processing  (361 genes)  IEA  
GO CC
GO:0030687 [list] [network] preribosome, large subunit precursor  (41 genes)  IEA  
GO:0005730 [list] [network] nucleolus  (353 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (2019 genes)  IEA  
Protein NP_001236315.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 7,  mito 2  (predict for NP_001236315.2)
Subcellular
localization
TargetP
other 8  (predict for NP_001236315.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100500064

.
gma-r.7
for
100500064

.
gma-u.5
for
100305462

.
mtr-u.5
for
11418824

.
ppo-u.5
for
7490756

.
ppo-u.5
for
7485154

.
ath-u.5
for
AT1G25260

.
vvi-u.5
for
100244591

.
sly-u.5
for
101262055

.
osa-u.5
for
9270809

.
osa-u.5
for
4349548

.
zma-u.5
for
100194040

.
zma-u.5
for
100282271

.


Ortholog ID: 6141
Species ath gma gma sly osa osa zma zma bra bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna cre sbi sbi sot cit bdi nta nta
Symbol AT1G25260 LOC100305462 LOC100500064 LOC101262055 LOC9270809 LOC4349548 LOC100282271 LOC100194040 LOC103840549 LOC103835442 LOC100244591 LOC7490756 LOC7485154 LOC11418824 LOC123120506 LOC123103215 LOC123395342 LOC107925356 LOC107921063 LOC106361875 LOC106361936 CHLRE_06g261700v5 LOC8079964 LOC110429537 LOC102592687 LOC102628495 LOC100838239 LOC107773865 LOC107807980
Function* Ribosomal protein L10 family protein ribosomal protein L10 family protein ribosomal protein L10 family protein uncharacterized LOC101262055 uncharacterized LOC9270809 uncharacterized LOC4349548 mRNA turnover protein 4 ribosomal protein L10 homolog mRNA turnover protein 4 homolog mRNA turnover protein 4 homolog uncharacterized LOC100244591 uncharacterized LOC7490756 uncharacterized LOC7485154 mRNA turnover protein 4 homolog mRNA turnover protein 4 homolog mRNA turnover protein 4 homolog mRNA turnover protein 4 homolog mRNA turnover protein 4 homolog mRNA turnover protein 4 homolog mRNA turnover protein 4 homolog mRNA turnover protein 4 homolog uncharacterized protein mRNA turnover protein 4 homolog mRNA turnover protein 4 homolog mRNA turnover protein 4 homolog uncharacterized LOC102628495 mRNA turnover protein 4 homolog uncharacterized LOC107773865 uncharacterized LOC107807980
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 3
sly03013 Nucleocytoplasmic transport 2
sly03008 Ribosome biogenesis in eukaryotes 2
sly03010 Ribosome 2
sly04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 7
osa03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 2
bra03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 2
ppo03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 9
ppo03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 2
tae04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 4
hvu03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03020 RNA polymerase 2
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03020 RNA polymerase 2
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 6
sot03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 839109 100305462 100500064 101262055 9270809 4349548 100282271 100194040 103840549 103835442 100244591 7490756 7485154 11418824 123120506 123103215 123395342 107925356 107921063 106361875 106361936 5722025 8079964 110429537 102592687 102628495 100838239 107773865 107807980
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