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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100500087   uncharacterized LOC100500087 
 gma-r.7   100500087   uncharacterized LOC100500087 
 gma-u.5   100499922   40S ribosomal protein S18 
 gma-u.5   100791227   40S ribosomal protein S18 
 gma-u.5   100306646   uncharacterized LOC100306646 
 mtr-u.5   11414190   40S ribosomal protein S18 
 mtr-u.5   11428006   40S ribosomal protein S18 
 mtr-u.5   25496287   40S ribosomal protein S18 
 ppo-u.5   7492484   40S ribosomal protein S18 
 ppo-u.5   7480033   40S ribosomal protein S18 
 ppo-u.5   7464841   40S ribosomal protein S18 
 ath-u.5   RPS18C   S18 ribosomal protein 
 ath-u.5   PFL   Ribosomal protein S13/S18 family 
 ath-u.5   AT1G34030   Ribosomal protein S13/S18 family 
 vvi-u.5   100254425   small ribosomal subunit protein uS13z/uS13y/uS13x 
 sly-u.5   101266399   small ribosomal subunit protein uS13z/uS13y/uS13x 
 sly-u.5   101268633   40S ribosomal protein S18-like 
 sly-u.5   101249649   small ribosomal subunit protein uS13z/uS13y/uS13x 
 osa-u.5   4334407   small ribosomal subunit protein uS13z/uS13y/uS13x 
 osa-u.5   107275870   small ribosomal subunit protein uS13z/uS13y/uS13x 
 osa-u.5   4342526   small ribosomal subunit protein uS13z/uS13y/uS13x 
 zma-u.5   100285246   40S ribosomal protein S18 
 zma-u.5   100273341   ribosomal protein S18 

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Top 50 coexpressed genes to 100500087 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100500087 (gma-u.5 coexpression data)

CoexMap"100500087"


gmaLOC100500087 | Entrez gene ID : 100500087    
Species gma mtr ppo ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 5 3 3 3 1 3 3 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG gmx03010 [list] [network] Ribosome (1072 genes)
GO BP
GO:0006412 [list] [network] translation  (852 genes)  IEA  
GO CC
GO:0015935 [list] [network] small ribosomal subunit  (172 genes)  IEA  
GO:0005840 [list] [network] ribosome  (633 genes)  IEA  
GO:0005829 [list] [network] cytosol  (1702 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (610 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (2019 genes)  IEA  
Protein NP_001236608.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  nucl 3  (predict for NP_001236608.1)
Subcellular
localization
TargetP
other 6  (predict for NP_001236608.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100500087

.
gma-r.7
for
100500087

.
gma-u.5
for
100499922

.
gma-u.5
for
100791227

.
gma-u.5
for
100306646

.
mtr-u.5
for
11414190

.
mtr-u.5
for
11428006

.
mtr-u.5
for
25496287

.
ppo-u.5
for
7492484

.
ppo-u.5
for
7480033

.
ppo-u.5
for
7464841

.
ath-u.5
for
RPS18C

.
ath-u.5
for
PFL

.
ath-u.5
for
AT1G34030

.
vvi-u.5
for
100254425

.
sly-u.5
for
101266399

.
sly-u.5
for
101268633

.
sly-u.5
for
101249649

.
osa-u.5
for
4334407

.
osa-u.5
for
107275870

.
osa-u.5
for
4342526

.
zma-u.5
for
100285246

.
zma-u.5
for
100273341

.


Ortholog ID: 2165
Species ath ath gma gma sly sly osa osa zma zma bra bra vvi ppo ppo mtr mtr tae tae hvu ghi ghi bna bna cre sbi sbi sot sot cit cit bdi bdi nta nta
Symbol AT1G34030 RPS18C LOC100500087 LOC100791227 LOC101249649 LOC101268633 LOC4334407 LOC107275870 LOC100285246 LOC100273341 LOC103840031 LOC103858540 LOC100254425 LOC7492484 LOC7464841 LOC11428006 LOC11414190 LOC123157009 LOC123149133 LOC123452656 LOC107943702 LOC107910470 LOC106423553 LOC111214089 CHLRE_06g272950v5 LOC8060714 LOC8061179 LOC102587187 LOC102586955 LOC102627922 LOC102628952 LOC100828019 LOC100844498 LOC107814426 LOC107798308
Function* Ribosomal protein S13/S18 family S18 ribosomal protein uncharacterized LOC100500087 40S ribosomal protein S18 small ribosomal subunit protein uS13z/uS13y/uS13x 40S ribosomal protein S18-like small ribosomal subunit protein uS13z/uS13y/uS13x small ribosomal subunit protein uS13z/uS13y/uS13x 40S ribosomal protein S18 ribosomal protein S18 40S ribosomal protein S18 40S ribosomal protein S18 small ribosomal subunit protein uS13z/uS13y/uS13x 40S ribosomal protein S18 40S ribosomal protein S18 40S ribosomal protein S18 40S ribosomal protein S18 40S ribosomal protein S18 40S ribosomal protein S18 40S ribosomal protein S18 40S ribosomal protein S18 40S ribosomal protein S18 40S ribosomal protein S18 40S ribosomal protein S18 ribosomal protein S18 40S ribosomal protein S18 40S ribosomal protein S18 40S ribosomal protein S18-like 40S ribosomal protein S18 40S ribosomal protein S18 40S ribosomal protein S18 40S ribosomal protein S18 40S ribosomal protein S18 small ribosomal subunit protein uS13z/uS13y/uS13x small ribosomal subunit protein uS13z/uS13y/uS13x-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 16
sly03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 13
mtr03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 12
tae03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 17
ghi03018 RNA degradation 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 16
sot00220 Arginine biosynthesis 3
sot00250 Alanine, aspartate and glutamate metabolism 3
sot04120 Ubiquitin mediated proteolysis 2
sot00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 19
bdi03018 RNA degradation 2
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 20
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 840300 826569 100500087 100791227 101249649 101268633 4334407 107275870 100285246 100273341 103840031 103858540 100254425 7492484 7464841 11428006 11414190 123157009 123149133 123452656 107943702 107910470 106423553 111214089 5721802 8060714 8061179 102587187 102586955 102627922 102628952 100828019 100844498 107814426 107798308
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