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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100500179   40S ribosomal protein 
 gma-r.7   100500179   40S ribosomal protein 
 gma-m.5   100500179   40S ribosomal protein 
 gma-u.5   100306473   40S ribosomal protein S20 
 gma-u.5   100500017   40S ribosomal protein S20-2 
 gma-u.5   100499912   uncharacterized LOC100499912 
 mtr-u.5   11428199   40S ribosomal protein S20-2 
 mtr-u.5   25484890   40S ribosomal protein S20-2 
 mtr-u.5   11441953   40S ribosomal protein S20-2 
 ppo-u.5   7482146   40S ribosomal protein S20-1 
 ppo-u.5   7476756   40S ribosomal protein S20-1 
 ath-u.5   AT3G45030   Ribosomal protein S10p/S20e family protein 
 ath-u.5   AT3G47370   Ribosomal protein S10p/S20e family protein 
 ath-u.5   AT5G62300   Ribosomal protein S10p/S20e family protein 
 bra-r.6   103837034   40S ribosomal protein S20-2 
 bra-r.6   103874674   40S ribosomal protein S20-2 
 bra-r.6   103837413   40S ribosomal protein S20-2 
 vvi-u.5   100258347   40S ribosomal protein S20-2-like 
 ghi-r.1   107930161   40S ribosomal protein S20-2 
 ghi-r.1   107933184   40S ribosomal protein S20-2 
 bna-r.1   106379725   40S ribosomal protein S20-2 
 bna-r.1   106366103   40S ribosomal protein S20-2 
 bna-r.1   111213347   40S ribosomal protein S20-1 
 cit-r.1   102621376   40S ribosomal protein S20-2 
 sly-u.5   101245205   ribosomal protein S10p/S20e family protein 
 sly-u.5   101244904   small ribosomal subunit protein uS10y 
 sot-r.1   102589010   40S ribosomal protein S20-2-like 
 sot-r.1   102584651   40S ribosomal protein S20-2 
 nta-r.1   107832707   small ribosomal subunit protein uS10y 
 nta-r.1   107828686   small ribosomal subunit protein uS10y 
 nta-r.1   107765328   small ribosomal subunit protein uS10y 
 osa-u.5   4348185   small ribosomal subunit protein uS10z/uS10x 
 osa-u.5   4332257   small ribosomal subunit protein uS10z/uS10x 
 osa-u.5   4340027   40S ribosomal protein S20-like 
 zma-u.5   118473410   40S ribosomal protein S20-2 
 zma-u.5   103633583   40S ribosomal protein S20-2 
 tae-r.2   123076077   40S ribosomal protein S20-like 
 tae-r.2   123088168   40S ribosomal protein S20 
 tae-r.2   123106401   40S ribosomal protein S20-like 
 hvu-r.1   123397911   40S ribosomal protein S20-like 
 hvu-r.1   123407968   40S ribosomal protein S20 
 hvu-r.1   123411377   40S ribosomal protein S20 
 sbi-r.1   8069075   40S ribosomal protein S20 
 sbi-r.1   8078846   40S ribosomal protein S20-2 
 bdi-r.1   100838410   40S ribosomal protein S20 
 cre-r.1   CHLRE_16g660150v5   uncharacterized protein 

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Top 50 coexpressed genes to 100500179 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100500179 (gma-u.5 coexpression data)

CoexMap"100500179"


gmaLOC100500179 | Entrez gene ID : 100500179      
Species gma mtr ppo ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 6 3 2 3 3 1 2 3 1 2 2 3 3 2 3 3 2 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG gmx03010 [list] [network] Ribosome (1072 genes)
GO BP
GO:0006412 [list] [network] translation  (852 genes)  IEA  
GO CC
GO:0022627 [list] [network] cytosolic small ribosomal subunit  (138 genes)  IEA  
GO:0005840 [list] [network] ribosome  (633 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (610 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (2019 genes)  IEA  
Protein NP_001238046.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 7,  extr 1,  E.R. 1,  golg 1  (predict for NP_001238046.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001238046.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100500179
gma-r.7
for
100500179
gma-m.5
for
100500179
gma-u.5
for
100306473
gma-u.5
for
100500017
gma-u.5
for
100499912
mtr-u.5
for
11428199
mtr-u.5
for
25484890
mtr-u.5
for
11441953
ppo-u.5
for
7482146
ppo-u.5
for
7476756
ath-u.5
for
AT3G45030
ath-u.5
for
AT3G47370
ath-u.5
for
AT5G62300
bra-r.6
for
103837034
bra-r.6
for
103874674
bra-r.6
for
103837413
vvi-u.5
for
100258347
ghi-r.1
for
107930161
ghi-r.1
for
107933184
bna-r.1
for
106379725
bna-r.1
for
106366103
bna-r.1
for
111213347
cit-r.1
for
102621376
sly-u.5
for
101245205
sly-u.5
for
101244904
sot-r.1
for
102589010
sot-r.1
for
102584651
nta-r.1
for
107832707
nta-r.1
for
107828686
nta-r.1
for
107765328
osa-u.5
for
4348185
osa-u.5
for
4332257
osa-u.5
for
4340027
zma-u.5
for
118473410
zma-u.5
for
103633583
tae-r.2
for
123076077
tae-r.2
for
123088168
tae-r.2
for
123106401
hvu-r.1
for
123397911
hvu-r.1
for
123407968
hvu-r.1
for
123411377
sbi-r.1
for
8069075
sbi-r.1
for
8078846
bdi-r.1
for
100838410
cre-r.1
for
CHLRE_16g660150v5


Ortholog ID: 1707
Species gma gma gma mtr mtr mtr ppo ppo ath ath ath bra bra bra vvi ghi ghi ghi bna bna bna cit sly sly sot sot nta nta nta osa osa osa zma zma tae tae tae hvu hvu hvu sbi sbi bdi cre
Symbol LOC100306473 LOC100803623 LOC100813093 LOC25484890 LOC11441953 LOC11405904 LOC7482146 LOC7476756 AT3G45030 AT3G47370 AT5G62300 LOC103837034 LOC103852140 LOC103857176 LOC100258347 LOC107930161 LOC107933184 LOC107953666 LOC111213347 LOC106423861 LOC106405973 LOC102621376 LOC101245205 LOC101244904 LOC102589010 LOC102584651 LOC107832707 LOC107765328 LOC107784562 LOC4348185 LOC4332257 LOC4340027 LOC118473410 LOC103633583 LOC123088168 LOC123106401 LOC123190591 LOC123397911 LOC123407968 LOC123411377 LOC8069075 LOC8078846 LOC100838410 CHLRE_16g660150v5
Function* 40S ribosomal protein S20 40S ribosomal protein S20-2-like 40S ribosomal protein S20-2 40S ribosomal protein S20-2 40S ribosomal protein S20-2 40S ribosomal protein S20-2 40S ribosomal protein S20-1 40S ribosomal protein S20-1 Ribosomal protein S10p/S20e family protein Ribosomal protein S10p/S20e family protein Ribosomal protein S10p/S20e family protein 40S ribosomal protein S20-2 40S ribosomal protein S20-1 40S ribosomal protein S20-1-like 40S ribosomal protein S20-2-like 40S ribosomal protein S20-2 40S ribosomal protein S20-2 40S ribosomal protein S20-2 40S ribosomal protein S20-1 40S ribosomal protein S20-1 40S ribosomal protein S20-1-like 40S ribosomal protein S20-2 ribosomal protein S10p/S20e family protein small ribosomal subunit protein uS10y 40S ribosomal protein S20-2-like 40S ribosomal protein S20-2 small ribosomal subunit protein uS10y small ribosomal subunit protein uS10y small ribosomal subunit protein uS10y small ribosomal subunit protein uS10z/uS10x small ribosomal subunit protein uS10z/uS10x 40S ribosomal protein S20-like 40S ribosomal protein S20-2 40S ribosomal protein S20-2 40S ribosomal protein S20 40S ribosomal protein S20-like 40S ribosomal protein S20 40S ribosomal protein S20-like 40S ribosomal protein S20 40S ribosomal protein S20 40S ribosomal protein S20 40S ribosomal protein S20-2 40S ribosomal protein S20 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 10
gma03008 Ribosome biogenesis in eukaryotes 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 18
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 11
bra03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 12
bra03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 13
bna03060 Protein export 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 17
bna03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 14
bna03060 Protein export 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 20
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 20
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 18
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 3
tae03060 Protein export 2
tae04141 Protein processing in endoplasmic reticulum 2
tae04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 9
hvu03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 19
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100306473 100803623 100813093 25484890 11441953 11405904 7482146 7476756 823638 823891 836351 103837034 103852140 103857176 100258347 107930161 107933184 107953666 111213347 106423861 106405973 102621376 101245205 101244904 102589010 102584651 107832707 107765328 107784562 4348185 4332257 4340027 118473410 103633583 123088168 123106401 123190591 123397911 123407968 123411377 8069075 8078846 100838410 5723488
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