ATTED-II : GeneCoexpression result

Species	Gene	Description
gma-u.5	100500469	cellulose synthase-like protein H1
gma-r.7	100500469	cellulose synthase-like protein H1
gma-u.5	100795709	cellulose synthase-like protein H1
gma-u.5	100795671	cellulose synthase-like protein H1
gma-u.5	100788824	cellulose synthase-like protein H1
mtr-u.5	11414970	cellulose synthase-like protein H1
mtr-u.5	11417352	cellulose synthase-like protein H1
mtr-u.5	25492160	cellulose synthase-like protein H1
ppo-u.5	7489892	cellulose synthase-like protein H1
ath-u.5	CSLB03	cellulose synthase-like B3
ath-u.5	CSLB04	cellulose synthase-like B4
ath-u.5	CSLB01	cellulose synthase-like B1
vvi-u.5	100255096	cellulose synthase-like protein H1
vvi-u.5	100260280	cellulose synthase-like protein H1
vvi-u.5	100248315	cellulose synthase-like protein H1
sly-u.5	101259456	cellulose synthase-like protein H1
osa-u.5	4348359	cellulose synthase-like protein H1
osa-u.5	4335860	cellulose synthase-like protein H2
zma-u.5	103646451	cellulose synthase-like protein H1

Annotation

functional annotation

KEGG

GO BP

GO:0009833 [list] [network] plant-type primary cell wall biogenesis	(58 genes)	IEA
GO:0030244 [list] [network] cellulose biosynthetic process	(78 genes)	IEA

GO CC

GO:0005802 [list] [network] trans-Golgi network	(213 genes)	IEA
GO:0005886 [list] [network] plasma membrane	(1870 genes)	IEA

GO MF

GO:0016760 [list] [network] cellulose synthase (UDP-forming) activity

(59 genes)

IEA

Protein

XP_006592368.1 [sequence] [blastp]
XP_006592369.1 [sequence] [blastp]

Subcellular
localization
wolf

plas 10	(predict for XP_006592368.1)
plas 10	(predict for XP_006592369.1)

Subcellular
localization
TargetP

other 5	(predict for XP_006592368.1)
other 5	(predict for XP_006592369.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	gma-u.5 for 100500469	gma-r.7 for 100500469	gma-u.5 for 100795709	gma-u.5 for 100795671	gma-u.5 for 100788824	mtr-u.5 for 11414970	mtr-u.5 for 11417352	mtr-u.5 for 25492160	ppo-u.5 for 7489892	ath-u.5 for CSLB03	ath-u.5 for CSLB04	ath-u.5 for CSLB01	vvi-u.5 for 100255096	vvi-u.5 for 100260280	vvi-u.5 for 100248315	sly-u.5 for 101259456	osa-u.5 for 4348359	osa-u.5 for 4335860	zma-u.5 for 103646451

Ortholog

Ortholog ID: 2703

Species

gma

mtr

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

cellulose synthase-like protein B5

cellulose synthase-like protein H1

Cellulose synthase family protein

cellulose synthase-like protein B6

cellulose synthase-like protein B3

cellulose synthase-like protein H1

cellulose synthase-like protein B4

cellulose synthase-like protein B3

cellulose synthase-like protein B4

cellulose synthase-like protein H1

cellulose synthase-like protein H2

cellulose synthase-like protein H1

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00430	Taurine and hypotaurine metabolism	2
gma00460	Cyanoamino acid metabolism	2
gma00480	Glutathione metabolism	2
gma00590	Arachidonic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00240	Pyrimidine metabolism	3
gma00760	Nicotinate and nicotinamide metabolism	2
gma01232	Nucleotide metabolism	2
gma00562	Inositol phosphate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00908	Zeatin biosynthesis	5
ghi04016	MAPK signaling pathway - plant	2
ghi04070	Phosphatidylinositol signaling system	2
ghi04075	Plant hormone signal transduction	2
ghi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00908	Zeatin biosynthesis	5
ghi04016	MAPK signaling pathway - plant	2
ghi04070	Phosphatidylinositol signaling system	2
ghi04075	Plant hormone signal transduction	2
ghi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00902	Monoterpenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00908	Zeatin biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00906	Carotenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00010	Glycolysis / Gluconeogenesis	2
zma00710	Carbon fixation by Calvin cycle	2
zma01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00630	Glyoxylate and dicarboxylate metabolism	4
tae00710	Carbon fixation by Calvin cycle	4
tae01200	Carbon metabolism	4
tae00020	Citrate cycle (TCA cycle)	3
tae00270	Cysteine and methionine metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00460	Cyanoamino acid metabolism	3
tae00500	Starch and sucrose metabolism	3
tae00999	Biosynthesis of various plant secondary metabolites	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00380	Tryptophan metabolism	3

Expression

Expression pattern

Entrez Gene ID^*

100780817

100795671

11417352

11417353

7489892

827195

103833345

103865205

100261952

100244815

107912646

107924700

106427668

106427669

102626450

101259456

102583176

107786528

107796039

4348359

4335860

103646451

123053314

123045469

123426726

110436385

8077609

100827122

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100500469 (gma-u.5 coexpression data)

Top 50 enrichment test to 100500469 (gma-u.5 coexpression data)


Species	gma	mtr	ppo	ath	vvi	sly	osa	zma	hvu	bna	cit	bra	ghi	sbi	bdi	nta	tae	cre	sot
Paralog	5	3	1	3	3	1	2	1	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100500469 (gma-u.5 coexpression data)

Top 50 enrichment test to 100500469 (gma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**